Solanum stenotomum: 125866397
Help
Entry
125866397 CDS
T08385
Name
(RefSeq) calcium-binding protein CAST
KO
K13448
calcium-binding protein CML
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125866397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_9
AIF-1
EF-hand_4
EF-hand_14
SPARC_Ca_bdg
Dockerin_1
Motif
Other DBs
NCBI-GeneID:
125866397
NCBI-ProteinID:
XP_049402753
LinkDB
All DBs
Position
5:complement(56205454..56206481)
Genome browser
AA seq
199 aa
AA seq
DB search
MGSVQDENKDEFKQRLTRGKLKPSSSSSFRLRSPSLNSIRLRRIFDVFDRNHDCLISVEE
LSQALNLLGLDADLSEIESMVKLHIKPENTGLRFEDFEALHRSLNDVFFGSTCEDKLGLN
PDPTQDESDLKEAFDVFDENGDGFISAKELQVVLEKLGLPEGSEIDRVEMMISSVDQDHD
GRVDFFEFKDMMRTVIVPS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgggatccgtgcaagatgagaataaggatgaatttaaacaaaggcttacccggggaaaa
ctcaagccttcttcctcatcgtcgttccgtctccgaagcccgagtctgaattccattcgt
cttcgtcgaatcttcgatgtgttcgatagaaaccacgattgtttgatcagcgttgaagaa
ctcagccaagcacttaacctgcttggattagacgccgatctatcagaaattgaatccatg
gtgaaattacacatcaaaccagaaaacactggtcttagattcgaagatttcgaagctttg
catcgatctctgaacgacgttttcttcgggtcaacatgtgaagataagctcgggttgaat
ccggatccgacacaggatgaatcggatctgaaagaagcgtttgatgttttcgatgagaac
ggcgatggattcatatcggcgaaggaattgcaggtggtgctagagaaattgggattgccg
gaaggaagtgaaattgatagagtggagatgatgatttcgtcagttgatcaggatcatgat
ggtcgcgttgatttcttcgagttcaaggatatgatgcgtactgttattgttccttcatga
DBGET
integrated database retrieval system
