Solanum stenotomum: 125866559
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Entry
125866559 CDS
T08385
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNOM
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125866559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125866559
Membrane trafficking [BR:
sstn04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
125866559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
Motif
Other DBs
NCBI-GeneID:
125866559
NCBI-ProteinID:
XP_049402777
LinkDB
All DBs
Position
6:54816823..54824652
Genome browser
AA seq
1449 aa
AA seq
DB search
MGRLRPQSSIKAIEEEPEDCETTSSNKTAIACMINSEVSAVLAVMRRNVRWGGRYVSGDD
QLEHSLIQSLKTLRKQVFSWQHSGQTISPALYLQPFLDVIRSDETGAPITGVALSSVFKI
LTLDILDLDAVNIEDAMHSVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMRSRTSVVL
SNQHVCTIVNTCFRVVHQAGAKSEVLQRIARHTMHELVRCIFAHLPEVDNTQHSIVRQHG
SSKNEVAGIDNEYSLSSKSENGSGPSEYDSLPPSGGFTSASTGLLSSVTEEGMVMGDNGK
DSVPYDLHLMTEPYGVPCMVEIFHFLCSLLNVVEHVGMGPRVNTMAFDEDVPLFALGLIN
SAVELGGPAICSHPRLLSLVQDELFRNLMQFGLSMSPLILSMVCSIVLNLYQHLRTELKL
QLEAFLSCVVLRLAQSRYGASYQQQEVAMEALVDFCRQKSFMVEMYANLDCDITCSNIFE
ELANLLSKSAFPVNSPLSSMHILALDGLIAVIQGMAERIGNGSYSSEYTPINLEEYSPFW
MVKCENYSDPDHWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPEKLDPQSV
ACFFRFTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGE
SQKIARVLEAFSERYYEQSPQILANKDAALLLSYSIIMLNTDQHNVQVKKKMTEEDFIRN
NRHINGGNDLPREFLSELYHSICNNEIRTTPEQGAGFAEMNPSRWIDLMHKSKKTPPYIM
CDSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEDVYQTCIDGFLAVAKISACHHLEDVLD
DLVVSLCKFTTLLNPSLVEEPVLAFGDDAKARKATVTVFTIANKCGDFIRTGWRNILDCI
LRLHKLGLLPARVASDAADDSEASSDPGHGKSLPNSLSAAHMQSLGTPRRSSGLMGRFSQ
LLSIDTEEPRSQPTEQQLAAHQRTLQTIQKCQIDTIFTESKFLLADSLLQLARALIWAAG
RPQKGSSSPEDEDTAVFCLELLIAITLNNRDRIALLWQGVYEHIAHIVHSTIMPCALIEK
AVFGLLRICQRLLPYKENLADDLLRSLQLVTKLDARVTDAYCEQITQEVSRLVRANASHI
RSQMGWRTITQLLSITARHPEASEAGFDVLGFIMSDGSHLSPANFVLCIDAARNFAESRV
GPADRPICAVDLMAGSAACLACWSKDTREAMAEAEALKLSQDIGEMWLRLVQGLRKVCLD
QREVRNHALSSLQMCLTGVDEMYLSHGLWLQCFDIVIFTMLDDLIELTSQKDYRNMEETL
ILALKLLTKVFLQLLHELCQLTTFCKLWLGVLNRMEKYLKVKVRGKKSEKLQELVPELLK
NTLVVMKSKGVLVQRSALGGDSLWELTWLHVNNIVPSLQAEVFPENESGHVESDQTDVGG
TAYGVTDPS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtttaaggccacaatctagtatcaaggcaattgaagaggaaccagaagattgt
gagacaacctcttccaacaaaactgctatagcttgtatgattaactctgaagtaagtgct
gttttagcagtcatgagaagaaatgttaggtggggtggtcgttatgtttcaggagatgat
cagctagaacactctctaatccagtctcttaagacattgcgtaagcaggtattttcgtgg
cagcattcggggcaaaccatcagtccggccttatatctccagccatttctggatgttatt
cggtctgatgaaactggggcaccaatcactggtgttgcattgtcttctgttttcaagatt
ttgacccttgatattcttgatcttgatgctgtcaatattgaagatgcaatgcactctgtt
gtggatgctgtgactagttgcagatttgaggtgacagatcctgcatcagaagaagttgta
ttgatgaagatacttcaagttcttttggcatgcatgagaagtagaacatcagttgtgttg
agtaaccagcatgtttgcaccattgtcaacacatgcttcagagtagttcatcaagctgga
gctaaaagtgaggtcttacagcggatagcacgtcacactatgcatgaacttgtgagatgt
atttttgcacatcttccggaagttgacaacacacaacactccatagttagacagcacggt
tcctccaaaaacgaggttgctggtattgataacgagtacagtttgagtagcaagtcggag
aatgggagtggtccttctgaatatgatagtctaccaccttctggaggtttcacttctgct
tcaacaggtctgcttagcagtgttacagaagaaggcatggtcatgggtgacaacgggaag
gatagtgttccttatgacctacatttaatgactgaaccatatggagttccatgcatggtt
gagatatttcacttcttgtgctctttgttgaatgttgtagaacatgtagggatgggtcct
agggtaaatactatggcattcgatgaagatgttcctctatttgcccttggtttgatcaac
tcagccgttgaactgggaggccctgctatttgcagtcaccccagattgttgagtttggtc
caggatgaattattccgtaatctaatgcagtttggtttgtcaatgagtccattgattctt
tcaatggtctgcagtatcgttctaaatctgtatcagcacttgcgaactgaactgaaacta
cagcttgaggctttcttgtcctgtgtggtcctgagacttgcacaaagccgttatggggct
tcataccagcagcaggaagtagcaatggaggctcttgttgacttttgcaggcaaaagtcc
ttcatggtagaaatgtatgcaaatttagattgtgatatcacctgcagtaacatttttgaa
gaacttgcaaatttattatctaagagtgcattcccggtgaactctccattgtcttccatg
catattcttgctttggatggtctgattgctgttatccagggaatggctgagaggataggc
aatggatcctatagttcagaatacactccaataaatctagaggaatatagtccattttgg
atggtcaagtgtgagaactatagcgaccctgatcattgggtaccatttgtacgtcgacgg
aagtacatcaagagaaggttaatgattggagctgatcactttaatagggacccaaagaaa
ggtctagagtttcttcaaggaacacatctattgccggaaaaacttgatccccagagtgtg
gcttgctttttcaggttcacagctgggctagataagaatctcgttggggattttcttgga
aatcatgatgaattttgtgttcaggtgcttcatgagtttgctggaacatttgatttccaa
gacatgaacctagatactgcattgaggctgtttctggaaactttccgactgcctggggaa
tctcaaaagatagcaagggtgcttgaggcattttcagagagatactatgagcaatctcca
cagattctagctaataaagatgctgctctgttgttatcatattcaataataatgctcaac
actgaccagcacaatgttcaggtaaagaagaagatgacagaggaggatttcatccgtaac
aataggcacattaatggaggtaatgatcttcctcgtgaatttctatctgaattgtaccac
tcaatctgcaacaatgagatccggacaacaccagaacaaggtgctggttttgctgaaatg
aacccaagccgttggattgatttgatgcacaaatctaaaaaaactcctccatacatcatg
tgtgattctaaagcctaccttgatcatgatatgttcgcaataatgtcgggccctactatt
gctgctatctctgtggtgtttgatcatgctgaacatgaggatgtctaccaaacctgtata
gatggtttcttggctgttgcaaagatttcggcatgccatcatcttgaagatgttttggat
gatctagtggtatctctatgtaagttcacaaccctgttgaatccctcattggtggaggaa
cctgttttagcatttggtgatgatgcaaaagcaagaaaggcaactgttacagttttcact
atagcaaacaaatgtggtgattttatccgtactggttggagaaatatcttggattgcatc
ttaagactgcacaagcttggtcttcttcctgctcgtgtagccagtgatgcagctgatgac
tcagaggcatcttctgatccaggacatgggaaatccctccctaattcattgtctgctgct
catatgcaatccttaggtactcccagaagatcttcaggacttatgggacgatttagtcaa
ctcctatctatagatacagaagagcctaggtctcaacctactgagcaacaacttgcggct
catcagcgcacactgcagacaattcagaagtgtcaaattgataccatcttcacagaaagt
aagtttctcctagctgattctttgttgcagttggcaagggccctcatatgggctgctggg
agacctcagaaaggtagtagttccccggaggatgaagatactgcagtgttctgcttggaa
ttgctgattgcaatcactttgaacaatagagatagaatagcacttctttggcagggagtt
tatgaacatattgctcatattgtacactcaacaattatgccttgtgctctaattgagaaa
gctgtttttggactactacgcatctgccagaggctgcttccttataaagagaacttagca
gatgaccttctcagatcattacaacttgtaaccaagcttgatgcccgggtaactgatgca
tattgcgaacaaattacacaggaagtcagtcggctggttagagcaaatgcttcacatatc
cgatctcaaatgggatggcgaactattactcagttactttctataacagctagacatcca
gaagcttcggaagcaggatttgatgtcctaggtttcatcatgtctgatggatcccatttg
tctccggctaattttgttctttgcattgatgcagcaagaaattttgcagagtctcgtgtt
ggaccagctgatagacctatttgtgcggtggatcttatggcaggttctgctgcttgttta
gcatgctggtctaaagataccagggaagcgatggcagaggcagaagctttgaagctgtct
caggatataggggaaatgtggctgaggcttgtacagggtctgaggaaagtttgtctggat
cagagagaagttaggaatcatgctctttcatccctacaaatgtgcttgacaggagtagat
gaaatgtacctttcacatggtctctggttgcagtgctttgatattgtcattttcacaatg
ctggacgacttgattgagctcacatcacagaaagattatagaaacatggaagagacactt
attcttgccttgaagctgttaactaaggtgtttttacagttgcttcatgagctatgtcaa
ttgaccaccttctgcaaactctggcttggagtcctcaaccggatggagaaatacttgaag
gtgaaggtcagaggtaagaagagtgaaaaacttcaggagctagtccctgaacttcttaag
aacaccttggttgtaatgaaatctaagggggtactcgttcagaggagtgctctcggtgga
gatagcttgtgggaactgacatggttgcatgtgaataacattgttccttctctgcaagct
gaggttttccctgagaatgagtcaggacatgtagagtctgaccagacagacgtaggagga
actgcatatggtgttactgatccgagttga
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