Solanum stenotomum: 125866572
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Entry
125866572 CDS
T08385
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125866572
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125866572
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125866572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA_29
AAA_25
AAA
AAA_28
RsgA_GTPase
NTPase_1
DnaB_C
ABC_ATPase
DO-GTPase1
Motif
Other DBs
NCBI-GeneID:
125866572
NCBI-ProteinID:
XP_049402799
LinkDB
All DBs
Position
6:complement(55770985..55796289)
Genome browser
AA seq
1435 aa
AA seq
DB search
MEPTNSRGTSLREKIIRGSSLRGSSSSKRNSTNNSRWSGNDGEIFNRSTRDEDDEEALKW
AALEKLPTFDRLRKGLLFGSQGASAEIDIHDIGFQERNKLLERLVKVADEDNEKLLLKLR
QRIDRVGIDLPEIEVRYEHLTIEADAYIGSRALPTFINFITNFLEDILNPLHILPSRKRK
LTILNDVSGIIKPRRLTLLLGPPSSGKTTLLLALAGKLDSALKVAGKVTYNGHEMNEFVP
QRTAAYISQYDLHIGEMTVRETLEFYARCQGVGSSYEMLVELTRREKEAKIKPDPDIDIF
MKALAAEGQEANFITEYVLKLLGLDICADTMVGDEMIRGISGGQKKRVTTGEMLVGPSKA
LFMDEISTGLDSSTTYSIVNSLRQSVQILHGTAVISLLQPAPETYNLFDDIILLSDGKIV
YQGPREDVLGFFESMGFKCPDRKGVADFLQEVTSKKDQQQYWVRRDETYRFITSKEFAEA
YQSFHVGRKLVDDLAASYDKSKSHPAALSTQKYGIGKKQLLKVCTEREFLLMKRNSFVYI
FKFIQLTIMALISMTLFFRTKMPRDTIEDGVKYVGALFFVVTMIMFNGMAEIALTIYKLP
VFYKQRDLLFYPSWAYAMPTWILKIPITFVEVGLWVFLTYYVIGFDPSPARFFKQFLLLI
LVNQMASGLFRFIGATGRTMGVANTFGTFVLLLQFALGGFVLSRDDVKKWWLWGYWSSPM
MYSMNSILVNEFGGKRWKQIAPIGTDSLGVAVVRSRGFFTNAYWYWIGVGALIGFTIVFN
ICYSLALAYLNPFGKPQGMISEDSDDAKTTSTEKEVSTSEGKNKKKGMVLPFVPHSITFD
EVTYSVDMPQEMKNQGVTEDRLVLLNGVCGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT
GGYIEGSIKISGYPKKQETFARISGYCEQNDIHSPYVTVYESLVYSAWLRLPSDVDEKTR
KMFVDEVMELVELTPLRSALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD
ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGKEIYVGPLGHHSCH
LIRYFESIPGVSKIQDGYNPATWMLEVTNSAQEMMLGLDFTDLYKKSDLYRRNKILIREL
SVPGPGTKDLHFNNQYSQPFWTQCMACLWKQHWSYWRNPAYTAVRYIFTIIIALAIGTMF
WDLGTKVGKSQDLFNAMGSMYAPVLFLGFQNASSVMPVVAVERTVFYRERAAGMYSSLPY
AFGQAFIEIPYVFVQAVTYGVIIYAMIGFEWTVTKFFWYLFIMYFTLLYFTFYGMMSVAV
SPNQNIAQIVSLFGYAMWNLFSGFMIPRPSMPIWWRWYYWACPVAWTLYGLVASQFGDLQ
DKLTDSDETAKHFLRRYFGFKHDFLGVVAFVTVAYAVVFAFTFALAIKVFNFQKR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggagccaactaattcaagaggtactagtttgagagaaaaaataattaggggaagtagt
ttgagagggagctcaagttcaaagaggaatagtactaataactccaggtggagtggcaat
gatggggagatttttaatcgttcaacgagagacgaagatgatgaagaggctcttaaatgg
gcagctcttgaaaaacttccaacgtttgatcgtttgagaaaaggtctcttgtttggatca
caaggcgcatctgctgaaattgatatacatgatattggttttcaagaaagaaacaagttg
cttgaaaggcttgtcaaagttgcagatgaggataatgagaagctcttgttgaaactcagg
caaagaattgacagagttgggatagatttgccagaaatagaagtaagatatgagcattta
actattgaggcagatgcatatatcggaagtagagctttgcctacatttatcaactttatc
actaattttcttgaggatatattgaaccctctccatatcctaccgagtcgaaagaggaaa
ctaactattcttaatgatgtgagtggtatcattaagcctcgcagattgactttgctttta
ggacctccaagttccgggaaaactacattattattagctttggccggaaagcttgactct
gcccttaaggttgctggaaaagtgacctataatggacatgaaatgaatgagtttgtgccg
caaagaacagctgcttatattagccagtatgatttacatattggagaaatgactgtgaga
gaaaccttggaattctatgccagatgccagggagttggatcgagttatgagatgttggtt
gaactgacaagaagagagaaagaagcaaaaatcaagccagatcctgatattgatattttc
atgaaggcattagctgcagagggacaagaagccaattttattacagaatatgttctgaag
cttttgggactggatatttgtgcagatactatggtgggagatgaaatgataaggggtatt
tcaggaggacaaaagaagcgcgtgacaaccggtgaaatgcttgttggaccgtcgaaggca
cttttcatggatgaaatctcaactggattggatagttccactacttactcaatagtgaac
tcactaagacaatctgtgcaaatcttgcacggaactgctgtgatatctctcttgcagcca
gcacccgagacgtacaacttgtttgacgacattattctgttatcagatgggaaaattgtc
tatcagggccctcgagaggatgtgcttggcttcttcgagtccatgggtttcaaatgtcct
gatagaaaaggcgtggcagacttcttgcaagaagtgacttcaaagaaagatcaacagcaa
tattgggtgaggagggatgaaacttaccggtttatcacgtcaaaagaatttgctgaagca
tatcaatcgttccatgttggaaggaaactcgtggatgatcttgcagcttcatatgacaag
agtaaaagccatcctgctgctttgtcaactcaaaagtatggtatagggaagaaacaactc
ttaaaggtctgcactgaacgagaattcttactaatgaagaggaactcatttgtttacatc
ttcaagttcattcagcttacaattatggcactcatatcaatgactctctttttccgtact
aagatgccgcgtgatacaattgaagatggagtaaaatatgttggtgccctcttttttgta
gtcactatgattatgtttaacggaatggctgagatcgccctgacaatttacaaacttcct
gtcttctacaagcaaagggaccttctcttttacccttcatgggcttatgcaatgcccaca
tggatactcaaaatccctataacatttgttgaagttggactttgggtgttcctcacttac
tatgtcatcggatttgatccgagccctgcaagatttttcaaacagtttttgctactcata
ttagtaaaccagatggcgtcaggattgttccgcttcattggggcaactggaaggaccatg
ggagttgctaatacatttggaacatttgttctgcttttacagtttgcattgggtggattc
gttctttcacgagatgatgtgaagaaatggtggctatggggttactggtcatcaccgatg
atgtattctatgaattcaattcttgtgaatgaatttggtggaaaaaggtggaaacaaatt
gcaccaattggaactgattcacttggagttgcagttgtaagatctcgagggttcttcaca
aatgcatactggtactggataggcgtcggtgcactaattggattcacaatcgtctttaac
atctgctacagtcttgcactcgcttatctcaacccatttggtaagccgcaaggtatgata
tcagaagacagtgatgatgccaaaacaacgagcactgagaaagaagtgtccactagtgag
ggcaagaataagaaaaagggaatggttcttccatttgtaccgcattctataaccttcgat
gaagttacatactctgttgacatgcctcaggaaatgaaaaatcaaggtgtcactgaagat
agattggtacttctgaatggtgtatgtggagctttcaggcccggtgttttgacagcattg
atgggagttagtggtgctggaaaaacaacgttaatggatgtattggccggacgaaaaaca
ggaggatatattgagggtagtatcaagatatctggctatccgaagaagcaagaaacattt
gcacgtatatctggatactgtgaacagaatgatatccattcaccttatgttacagtttat
gagtcattagtatactcagcttggttgcgtttaccttctgatgttgatgaaaagaccaga
aagatgtttgttgatgaagttatggaacttgtggagcttacaccattaaggtcagcgttg
gttggtcttccaggagtcaacggtctctcaaccgagcaacgcaaaaggttgaccattgca
gtggaactagtggcaaacccctctatcattttcatggatgaaccaacttcggggttggat
gcaagagctgctgcaattgttatgagaactgttaggaacacagttgacacaggaagaacc
gttgtttgtaccatccatcaacctagtatagacatttttgaagcctttgatgagctattt
ctaatgaaacgaggaggaaaagagatatatgttggtccattgggtcaccattcttgccat
ttgatcagatactttgagtcaattcctggggtaagtaaaatacaagatggctacaatcca
gcaacttggatgttagaagtcacaaactcagctcaagaaatgatgttggggcttgatttc
accgatttatacaaaaaatcagatctttacaggaggaacaaaatattgattagagaactt
agcgtgcctggccctggtacaaaagacctgcatttcaacaatcaatactcacaaccattt
tggacccaatgtatggcttgcctttggaagcaacattggtcatactggcgtaatcctgct
tatactgcagtcagatatatctttacaatcatcatcgccttggccattgggacaatgttc
tgggatcttggtactaaagtcggtaagagccaagacctatttaacgctatgggatctatg
tatgctccagttctcttccttggttttcaaaatgcatcatcagtgatgcctgttgtagcc
gttgagcgtacagtattttacagagaaagagctgctggaatgtattcttccctcccatat
gcctttggacaagctttcattgaaataccatatgtctttgtgcaagctgttacctatggt
gttatcatctatgctatgatcggatttgaatggacagtgaccaagttcttttggtacttg
tttatcatgtatttcactctcttgtacttcaccttctatggtatgatgagcgttgccgtt
tccccaaatcaaaatattgcgcaaattgtctctctcttcggttatgcaatgtggaatctt
ttctcaggattcatgattccacgacctagtatgcccatatggtggagatggtactattgg
gcttgtcctgttgcctggacattgtatggtttggttgcatcgcaattcggagacctccaa
gataaacttactgatagtgatgaaacagccaaacatttcttgaggcgttacttcgggttc
aaacatgattttcttggagtagttgcatttgtgactgttgcatatgctgttgtttttgcc
ttcacatttgctttggctattaaggttttcaacttccagaaaagatag
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integrated database retrieval system
