Solanum stenotomum: 125866595
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Entry
125866595 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125866595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125866595
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125866595
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125866595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-Di19
Motif
Other DBs
NCBI-GeneID:
125866595
NCBI-ProteinID:
XP_049402834
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All DBs
Position
6:complement(55589822..55594517)
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AA seq
310 aa
AA seq
DB search
MASGGSSYQDIGDSHNAYADYGIAPKTAESKSSPFRKSTAVNIIGGNHGTRSNTAVHELL
ECPVCMNLMYPPIHQCPNGHTLCLKCKSKVHVCPICRHELGNIRCLALEKIAESLELPCR
YQVFGCQDIFTYHSRLQHEQNCKFRPYNCPYAGSECTVTGDIQSLVAHLKDDHKVDMHDG
CTFNHRYVKSNPQDVENATWMLTVFNCFGHQFCLHFEAFNVGVAPVYMAFLRFMGDDDDA
KKFSYSLEVGGFGRKLIWQGVPRSIRDSHKTVRDSLDGLLIQRSMALFFSGGDRKELKLK
VAGRIWREPL
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggaggcagcagttaccaggatattggtgattcgcataatgcatatgccgat
tatggtattgcacccaaaactgctgaatctaaaagctccccatttagaaaatccacagct
gttaatattattggtgggaatcatggaactagatctaatacagccgttcatgagctactt
gaatgccctgtttgtatgaatctaatgtaccctccaattcatcagtgtccaaatggtcat
actttatgcctgaagtgcaagtcaaaagtccatgtgtgcccaatttgccgccatgagctt
ggaaacataagatgtctagcattggagaaaattgcagagtcactggagttgccatgccga
taccaagtttttggctgtcaagatatattcacttatcacagtaggcttcagcatgagcag
aactgcaaatttcgtccatacaactgcccttatgcaggatctgaatgtactgttactggt
gatattcagtcccttgttgcacacctcaaagacgatcacaaggttgacatgcacgacggc
tgtaccttcaaccatcgctatgtcaaatccaatcctcaagacgttgaaaatgctacatgg
atgctgactgttttcaactgtttcggtcaccaattctgcttgcactttgaggctttcaac
gtcggagtggcgccagtatatatggcattccttcgttttatgggtgatgatgatgatgcg
aaaaaatttagttatagtcttgaagtaggtggctttggcagaaagttaatatggcaagga
gttcctaggagcatccgtgatagtcataaaactgtcagagacagtttagacgggctgctc
attcaaaggagcatggcactcttcttctctggtggtgaccggaaggagctaaagctgaag
gtggctgggcgcatttggagagaaccattgtaa
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