Solanum stenotomum: 125866610
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Entry
125866610 CDS
T08385
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125866610
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125866610
Surveillance factors
Other surveillance factors
125866610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
125866610
NCBI-ProteinID:
XP_049402849
LinkDB
All DBs
Position
6:complement(36208905..36217743)
Genome browser
AA seq
1553 aa
AA seq
DB search
MAEGNLDLPDDLLSSKTSDHSKGNGDNKPFMGQLDISKDQAMVDSSIPLSPQWLYVKPSD
TKMEPRPPSSLSLGSSVDSSQKEAWRTDVPDDKKDWRRTTVETESSRRWREEERETGLLG
RRERRKTDRRAEHDVNNRNSGLDTRRDNKWSSRWGPDDKEKENRSEKRIDVDKEDVHNDG
QTFVANRTVSERESDSRDKWRPRYKMEGNSAAPSSYRAAPGFGQERGKVEGSNVGFNLGR
GRSTGTIIRPSSVGAIGASPFENSVPGKSRISTGMFSYPRGKTLDIYRRQKLGSSLCSMP
ENMEEAPPVTQVIAIEPLAFVVPDAEEEAVLNDIWKGKITGGGVSHNSFRKGQSMDNVTE
TGDTEPNNTKMGAPSTDVTEETVDRLLKTSIGVEEVNTYSFVYENGVKVKFDGGDNLEGL
KDNVFEAADGSLLTRKIADNSDCFKYISRSQSDISAQSLPDSGVTRTPIFENNQHVAFDG
SLKVSDDSNSVFVKSSSEIYWNNLLGRGIPPEELSLYYRDPQGEIQGPFLGADIISWFDQ
GFFGMDLLVRLEDAPEDSPFFELGDVMPHLKFEHEHFGNTNLSQAVPSAVLEGKLDSDLR
SSASVSEMVGSAAFDGSSWPPSDFDGLGGHRIQSIPDHPARQFKPPYSQNEDYNDFVAQD
EEIVFPGRPGSGGNPIGKTSTGLTDPSNIHRATPSAMCEGGVPNHEETLHPLGLLWSELE
GTTGKSGPISDVPFRGTGQDQVLNSGAGRVGPFGAKMDSTSAAETWTDAYRRNAGSEPNL
YLDAMDASRLLHQDHEMSRFELAEKLFSQQLQQQHPHNLMSSHNSHLNEALMERGANHNS
IHQPQLASQAGQDLEHFMVLQLQQQRQLQLQQLQQQQQQQFHQQQMLMKEQQSHARQLVL
EQLLQSQVRDPSHTQSRLDAIRHNSALEQVLIKQQILSELQQRPHLPPRHAEPSIEHLIQ
AKFGQMSHQGPQNDLMELLSRAKHGQLHPLEQQVRQQEQAHERLRQRLEMDEDRQIGAVW
PVDETGQYLRNPGVARRANSGFGPLDIYQQQQIPPPEEHVSHLERNLSMQDRLQPGLYDT
GFMPLERTMSVPGGGPSVSLDAVNPLVHAQGLEMQDPNSRMHSAGHMPGFSTGIHLQSSH
RPLFSNQFHAPNVDTFENHWSERNGQLPPDWMDTRMQQLHLNGERQRRDFDVKRASEDQS
MWMSAGANDDSSKRLLMELLQQKSGQQSTEQAEMTRGILFERGLHSGHFSVTNASNRSFN
PLLDQDTSLNQAFTVGSYGSNSDLPPQRDHVNEIADSLDVCERLPFKSHSGALAEAQPVF
SSINDASQVHLEARESIVRQAGVTTVEGEMPINLLSRHTALGTGDCNVFKLSSRGSLDFY
NDKSDRGDSAMEEIPKERMAVTSKRPDNILPKRPPVLRISSTQEGLSEINSDSLARGKNP
SDGMASEGGKREAGGNAANQVPGAATSVKKDGRFRRTASCSDADVSETSFSDMLKSNAKK
PTAQEAHASEAIDATHRSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggaaatcttgatcttcctgacgatcttctttcctctaagacttccgatcac
tccaaaggtaatggtgacaacaagcctttcatgggtcagcttgatatttccaaagatcaa
gcaatggtggacagcagcattcctttgtctccacagtggctttatgttaaaccaagtgac
acaaagatggaaccgcgtccaccaagctctctgtcacttggaagttctgttgattcaagt
cagaaggaggcttggcgtacagatgtacctgacgacaagaaggattggagaagaacgaca
gtggagactgagagcagtcgccggtggcgtgaggaagaaagggaaactggcttgcttggt
cggagagaacgaaggaaaaccgatcgccgtgctgagcatgatgttaataaccgcaattct
gggcttgatacaaggcgtgataacaagtggtcttctaggtggggtcctgatgacaaagaa
aaagaaaatcgcagtgagaaaaggatagatgtagataaggaagatgttcataatgatggt
caaacatttgtggctaaccgtactgtctcagaacgggagtcagattctcgtgacaagtgg
cgtccacgctataaaatggagggcaactctgctgctccaagttcctatcgagctgctcca
ggttttggacaggagagaggaaaagtagaagggtcaaatgtgggatttaacttgggtcgt
gggaggtctactgggactattataagaccttcctctgtgggtgccattggtgcttcacca
tttgagaattctgttcctggaaaatcaagaatctcgactggcatgttcagttatccaagg
gggaaaactcttgacatataccgcaggcaaaagcttggctcatctctttgtagcatgcct
gaaaatatggaagaagctcccccagttactcaagtaattgctattgaaccattagctttt
gttgttcctgatgctgaggaggaggctgttctcaatgatatatggaagggtaaaattact
ggtggtggcgtttctcacaattcttttagaaagggtcaatcaatggataatgtcacagaa
acaggggatacagagcccaacaatacaaaaatgggtgctccctccactgatgtcactgaa
gagacagttgataggttgctgaaaacttcaataggtgttgaagaagtcaatacctatagc
tttgtttacgagaacggtgtcaaggtcaagtttgatggaggagataatcttgaaggactg
aaagacaatgtttttgaagctgcagatggaagtttgttgaccaggaagatagctgacaat
agtgactgctttaaatacattagtaggtcccaatctgatatttctgcgcagagcttacca
gattccggagtaaccaggactcctatctttgagaacaatcaacatgttgcttttgatggc
agtttgaaggtgtctgatgattcaaattctgtatttgtgaagtcctcttctgaaatctat
tggaacaaccttctaggaaggggtattccaccagaggagttgagtttgtactatcgtgat
cctcagggcgaaatccaggggccatttctcggagctgacatcatttcatggtttgatcag
ggattttttggtatggacttactagttcgcttggaagatgcccctgaagattcacctttc
tttgaacttggtgacgtaatgccgcatttgaaatttgaacatgaacattttggtaacacc
aatctttcccaggcagtaccatctgctgtactagaggggaagttggattctgatttacgt
agctcagcttctgtttctgagatggttggttctgctgcctttgatggctcgagctggccg
ccatctgattttgatggccttggtgggcatcgtattcagtcaatacctgatcatccagct
cgtcaatttaaacctccatattcacaaaatgaagactataatgattttgttgctcaagat
gaagaaattgtgtttccaggaagacctggaagcggtggtaatcctattggaaaaacttcc
actggtcttactgatccttcaaatatccaccgtgcaactccaagtgcaatgtgtgagggt
ggagttccaaatcatgaagagacattgcatccacttggtttattatggtcagagcttgaa
ggcactaccggaaagagtggtcctatctcagatgttccttttagaggaactggccaggat
caagttctaaactctggtgctggaagggttgggccatttggtgccaagatggactcaacc
tctgctgcggagacatggactgatgcttatagaagaaatgctggatctgaacccaactta
tatctagatgctatggatgccagccgcttattgcaccaggaccatgaaatgagccggttt
gagttagcagagaagctgttttcccaacaacttcagcaacaacatcctcataatttgatg
tcctctcataatagtcacttaaatgaagctttgatggaacgtggggcaaatcataattca
atacaccaaccacagttggcgagtcaggctgggcaggatctagagcactttatggtgctt
cagctgcaacagcagagacagttacagcttcaacaactgcagcaacagcaacagcaacag
ttccatcaacagcaaatgctaatgaaagaacaacagtcccatgctaggcagctggttctt
gaacaattattgcagagtcaagtacgggatccaagtcacacgcaatcacgtcttgatgct
attaggcataacagtgctctggagcaggtgttgataaagcaacaaattctgagtgaactg
caacagcgtccacatcttcctccaagacatgctgaaccatctattgagcatctcattcaa
gcaaagtttggtcaaatgtcgcatcaagggcctcaaaatgatttaatggagctcctatca
cgggcaaaacatggacagttgcaccctttagagcaacaagtccgtcaacaagaacaagca
catgaaaggttaagacaacgtttggaaatggatgaagatagacagattggtgctgtctgg
cctgttgatgaaactggtcagtatctaagaaatccaggtgttgctcgtcgagcaaactct
ggatttggtccattagatatttaccaacagcaacagataccccctcctgaagagcatgtt
agtcatctggaaaggaatttgtcaatgcaggatagacttcagccgggcctctatgacact
ggatttatgcccttggaacggacgatgtcagtacctggtggtggtcctagtgttagtttg
gatgctgtaaatcctctagtacatgcacaaggtttagaaatgcaagatccaaattcaaga
atgcactcagctggtcatatgcctggtttctcgactggcatccacttgcaatcttctcac
cgtcctctgttttcaaatcaatttcatgctccaaatgtagatacatttgaaaatcattgg
tccgaaagaaatggtcagttaccacctgattggatggatactaggatgcagcaactacat
cttaacggtgagaggcaaagaagagattttgatgtcaaaagggcttctgaagatcaaagt
atgtggatgtcagctggtgctaatgatgacagttcaaagcgattacttatggaactgctc
cagcaaaagtctggccagcagtcaactgagcaagcagaaatgaccagagggattttgttt
gagaggggcttacactccggtcacttttctgtgacaaatgcttcaaaccgttcgttcaac
cctcttttggaccaggatacgagtctaaaccaagcttttactgttgggtcatatggttct
aattcagatttgccaccacagagagatcatgtaaatgagattgctgatagtcttgatgtt
tgtgagagattgcccttcaaatctcattctggagctttagctgaagctcaacctgtcttt
tccagcatcaatgatgcctctcaggtacatttagaggctcgcgaaagtattgttaggcaa
gctggtgtgacgactgtagaaggggaaatgccaattaacttgcttagcaggcacactgca
ctcgggactggagattgtaatgttttcaaattatcttcacgtggaagtcttgacttctac
aatgacaagagtgatagaggggattcggctatggaggaaattcctaaggaacggatggct
gtgacatcaaaaaggccagataacatcttgccaaagcgtccacctgtcttgcgcatttct
tcaacccaggagggtctatcggagataaattctgatagccttgcgagaggcaaaaatcct
tcagatggcatggcttctgaagggggtaagagggaagcgggaggtaatgctgcaaatcaa
gttcctggtgctgcgacgtctgtaaagaaagatgggcgctttcgtcgaactgcatcttgt
agtgacgctgatgtttcagaaacatcattcagtgacatgcttaagagtaatgctaagaag
ccaacagctcaggaagcacatgcatcagaggcaatcgatgcaacacaccgtagtggtaag
aagaaaggaaagaaaggaagacaaattgatcctgctcttcttggtttcaaggttacaagc
aatcgcatcatgatgggtgagatacaacggatagaagattag
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integrated database retrieval system
