Solanum stenotomum: 125866618
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Entry
125866618 CDS
T08385
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
sstn
Solanum stenotomum
Pathway
sstn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125866618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125866618
Membrane trafficking [BR:
sstn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125866618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
125866618
NCBI-ProteinID:
XP_049402858
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All DBs
Position
6:60553360..60561296
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AA seq
784 aa
AA seq
DB search
MATEMAQPDAEGIDGVRMTWNAWPRTKVEASKCVIPIASSIHLIRPHTDLPTLPYVPLRC
KTCTAVLNPFARVDFQALIWICPFCFQRNHFPQHYSGISETNVPGELYPQFTTIQYTLPS
QNPQSFNPNPQNPLPESSVSPIYLFVLDTCMLEEELEFAKSALKRAIDMLPDNAMVGFIS
YGTQVQVHELGFSDMSKVYVFRGSKELSKDQVLDQLGLGSAGGRRTGGGPGMQKGGGQIG
VPNLGVTRFLLPASECEYTLNSLLDELSTDQWPVPQGNRALRCTGVALSVAAGLLGACVA
GTGARIMALVGGPCTEGPGTIVSKDLSEPVRSHKDLHKDAAPFFKKAVHFYEELAKQLVS
QGHVLDVFASALDQVGVAEMKVAIEKTGGLVVLAESFGHSVFKDSFKQIFEYGEQSLGLS
FNGTLEINCSKDIKIQGIIGPCTSLDKKGPAVSSTVTGEGNTTAWKLCGLDKNTCLTVFF
DVSSSEKSDPSGNINPQLYIQFLTSYQSPDGQTKLRVTTVTRRWVDAAVSNEELVQGFDQ
ETAAVVVARLASYKMEMEEDFDATRWLDRNLIRLCSKFGDYRKDEPSSFTLNPSFSLFPQ
FMFHLRRSQFLQVFNNSPDETAYFRMLLNREGISNAAVMIQPTLTAFSFNSLPFPALLDV
ASIAADRILLLDAYFSVVVFHGMTIAQWRNMGYQDQPEHQAFAQLLQVPHDEAQAIIRER
FPVPRLVVCDQHGSQARFLLVKLNPSATYNNANEMAAGSDVIFTDDVSLQVFFEHLQRLA
VQSS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagagatggcacaacctgatgctgaagggatcgatggagttcgtatgacatgg
aatgcttggcctaggacgaaagttgaagctagcaagtgcgttatcccaattgcttcatcg
atccatctgatccgtcctcatactgatcttcctacacttccttatgtacctctccgatgt
aaaacctgtaccgctgttctcaacccttttgctcgtgtagatttccaagccttaatctgg
atctgccctttttgtttccagcgtaaccatttccctcaacattattccggtatttctgaa
actaatgtacctggagagctttaccctcaattcactacgattcaatatactctcccttct
caaaacccacagagttttaatcctaacccacaaaaccctttaccggaatcttctgtttca
ccgatttatttgtttgttttggatacttgtatgttggaagaggagttggagtttgcgaaa
tcggcgttgaaaagggcgattgatatgttgccggataatgctatggtggggtttatatcg
tatggaacgcaggttcaggtgcatgagttggggttttcagatatgtctaaggtgtatgtt
tttcggggatcgaaggagttgtcgaaagatcaagttttggatcaattggggcttggtagt
gcgggtggaagacggactggtggtggccccgggatgcagaagggtggtggacagattggg
gttcctaatcttggtgttaccagattcttattgcctgcttcggagtgtgaatataccttg
aattctttgttagatgaattgagcacggatcaatggccagtcccacagggtaatagagcg
ttacgttgcactggcgttgctttgagtgtagcagctggattgcttggagcttgtgtggct
ggtactggtgctcggatcatggccttagtgggcggtccatgcacagagggacctgggacg
attgtgtcgaaagatctatcagaaccagttcgttctcataaggatctgcacaaggatgca
gcaccctttttcaaaaaggctgtccatttctatgaggaactcgcaaaacagcttgttagc
caaggtcacgtcttggatgtgtttgcttcagcacttgatcaggttggggttgctgagatg
aaagtagctattgaaaaaacaggaggattagttgttctagctgaaagctttggtcattct
gttttcaaagattctttcaagcaaatttttgaatatggtgaacagtctcttggactgtcc
ttcaatggtacattagagatcaactgctccaaggatattaaaattcaagggataattgga
ccatgcacatctttagataagaaaggacctgctgtttccagcacggtcaccggtgagggg
aatactacagcttggaagctgtgtggtctcgacaaaaacacttgcttaactgttttcttt
gatgtttcatctagtgagaaatcagacccttcaggcaatataaatccgcaattgtacata
cagtttctcacgagttaccagagtcctgatggccaaacaaaactacgagtcaccaccgtt
actagaagatgggttgatgctgctgttagtaatgaggaattggtgcaaggatttgatcaa
gagactgctgcagttgtagtggctagattagcttcttacaaaatggagatggaggaagat
tttgatgccacaaggtggctagatcgtaatctcattcgtctgtgctccaagtttggtgat
tatcggaaggatgaacccagctcattcactttgaatccctctttttcattgtttcctcaa
ttcatgtttcatttacggcgatcccagttcttacaagtgttcaataatagtccagatgag
acagcatatttccgcatgttgctcaatcgggagggcataagcaatgctgctgtcatgatt
cagccaacgctaacagcattttcattcaattcactgcctttccctgctttgttggatgtg
gcatccattgcagctgatcgcattctcttgttggatgcttattttagtgtagttgttttc
catggaatgacaatagctcaatggagaaacatgggataccaggaccagcctgagcaccag
gcatttgcacaactgttgcaagttccccatgatgaggcccaagcaatcatccgtgagagg
tttcctgttccaagactggtagtgtgtgatcagcatggctcccaggcaagattccttttg
gtaaaattgaatccatctgccacgtacaataatgcaaatgaaatggcagctggatcagac
gtgatctttacagatgatgtgagccttcaagtgttctttgagcatcttcagcggctagct
gtgcaatcttcttga
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