Solanum stenotomum: 125866730
Help
Entry
125866730 CDS
T08385
Name
(RefSeq) mRNA export factor GLE1-like isoform X1
KO
K18723
nucleoporin GLE1
Organism
sstn
Solanum stenotomum
Pathway
sstn03013
Nucleocytoplasmic transport
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125866730
03015 mRNA surveillance pathway
125866730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125866730
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125866730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
125866730
NCBI-ProteinID:
XP_049403028
LinkDB
All DBs
Position
6:41620413..41636216
Genome browser
AA seq
645 aa
AA seq
DB search
MGAVKLQFPLPKSVDGVTLDPNPDWTFDILLVELNSIEKKLNASSKFPIPFTKTESRQLS
ASKDNSRRGFVMQVSDDDVEDMDRDTKHEVGDHLLVGGKRFACDEIYLSDSDQSEEGLNI
ELQHDLMDKVGLVESALSELAHDHQLTIVEEMRDQLSALEAELTDESEKLASTLERVERN
TEAQREMNRKFDMQYQRKIAEALDDHLTTVQRDHEHRSQIEERRIRDDAAREEAKRKEKA
LQEEKARQERIRAETKVQARLEAERVEKEKAAALEAERKAVKEAAAASEKKSSESVTTAS
PEASKVSRDVTSQPVRPMSDGQKHSTGNTIRVTENAQKLEEKRLAVYNEIGAQNEALGLG
SNKAYRKFEMEIARRIRTITGSKENVRVKADELIKLISGSTCPQSISIAVFAQKVVSLCV
KPTGSFNSAVYAYGRVIVHVTSKIPLAMEILIAELNKVCIYTVPKYIIYSEAAFQTKEAY
YKAIGYAEEDGKIESTDSYVDRLSACMKLYGALVQTEVDGCQNLHGIREGWAWIARFLNV
FPANLYTAAALQAFLEMAGFALHKRYKTQFRKLLDIIARDFLTALKDRGDAKLVKVIVSL
RSYIESNQFLNEPEGWRLRSSLESHNFAPDSDHDQQYHYQQNRFY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggtgctgttaaactgcaatttccgttgcctaaaagtgttgatggagtcaccctggat
ccaaatcctgattggacctttgatattttattggttgagctcaattcgattgagaagaag
ctcaatgcatcatcaaaatttccaataccttttacgaaaacagaatcgcgacaactctcg
gcttcaaaggataattctcggagaggctttgttatgcaagtgtccgatgatgacgtggag
gatatggacagagatactaagcatgaagttggtgatcatttacttgtgggaggaaaacgg
tttgcttgtgacgaaatctatctgagtgatagcgaccaatctgaagaaggcctaaacatt
gaacttcaacatgatctaatggataaagtgggattagtggaaagtgctttatctgagtta
gctcatgaccatcaacttactattgtggaggaaatgagagatcaactatcagcacttgaa
gctgagttgacggatgaaagtgagaagcttgcctccacactagaacgagttgagagaaac
actgaagctcaaagggaaatgaacagaaaattcgacatgcagtaccagcgtaaaattgca
gaagcacttgatgatcacctaactacggtacaaagggatcacgaacacagatcccaaatt
gaagaaaggagaataagagatgatgcagctcgtgaagaggccaagaggaaagaaaaagct
cttcaagaagaaaaagcccggcaagaaagaattagagcagaaaccaaggtgcaggctagg
ctggaagctgaaagagttgagaaggaaaaagctgccgcgctggaagctgagaggaaagca
gtaaaagaagctgcagctgcgtccgagaagaagtcatctgagtcagtgactactgcttct
ccggaggctagcaaggtttcaagggatgtcactagtcagcctgtgagacccatgtctgat
gggcagaaacattcaacaggaaatacaatcagggtgacagaaaatgctcaaaaactggag
gagaaaagattagccgtttacaatgaaataggtgcgcagaatgaagcactgggattgggt
tcaaacaaggcttaccgaaagtttgaaatggaaatagccagacgaatcagaactatcact
ggttcaaaagaaaatgtcagagtgaaagcagatgaattaattaagctaattagtggttca
acatgtccacaatccatcagcattgcagtgttcgcgcagaaggtggtgtccctgtgtgtg
aaacctacaggaagctttaacagtgcagtctatgcttatggtcgtgtaattgtccatgtt
acatcaaagatccctcttgccatggaaattctcatagctgagttgaacaaagtttgcatt
tacacagttcctaagtacattatttactcagaggcagccttccagaccaaagaagcttat
tacaaagctattggctatgcagaggaagatgggaagatagaaagtactgatagttatgtg
gatcgcttaagtgcatgcatgaaattatatggtgctcttgttcagactgaagttgacggc
tgccaaaacttgcatggcatcagagaaggttgggcatggatagccagattcttaaatgtt
ttccctgcaaatttatacactgcagctgcattgcaggcttttcttgaaatggcaggtttt
gctctacacaaaagatataagacacaattcagaaagctgctggatatcattgctagagat
tttctaactgcattgaaagatcgaggtgatgcaaagttggtcaaagtgattgtgagtctc
cggagttatatagagtcaaatcagttcctgaatgaacctgagggctggcgcctcaggagt
tccttggaatcacacaatttcgctccagattcagatcatgatcaacagtatcattaccaa
cagaatagattctattaa
DBGET
integrated database retrieval system
