Solanum stenotomum: 125866745
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Entry
125866745 CDS
T08385
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00040
Pentose and glucuronate interconversions
sstn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125866745
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
125866745
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
125866745
NCBI-ProteinID:
XP_049403047
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Position
6:41239712..41242672
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AA seq
401 aa
AA seq
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MGMPLSFLLLLTLLSPIFTFSSHVPDPEVIVQEVNEKINASRRNLGYLSCGTGNPIDDCW
RCDPNWEKNRQRLADCAIGFGKQAIGGKDGNIYIVTDTSDDPVNPKPGTLRYGAIQDEPL
WIIFSRDMVIKLKEELMLNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDCKQG
GNAYVRDSPQHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNN
YMTHHNKVMLLGHSDTFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
YAIGGSASPTINSQGNRFLAPNDVFNKEVTKHEDAAESEWKNWNWRSEGDLMLNGAFFIR
SGAGASSSYAKASSLSARPSTLVNSITMNAGALGCKKGKKC
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgccactttcttttcttctccttcttactctattatctcctattttcacattc
tcctctcatgttcctgaccctgaagttatagtccaagaagttaatgagaaaatcaatgca
tcaagaaggaacttaggctatttatcatgtggcacaggcaatcctattgatgattgttgg
agatgtgatcctaattgggaaaaaaacagacaaagactagctgattgtgcaattggcttt
ggcaaacaagcaattggtggtaaagatggtaacatctacatagttactgacactagtgat
gatccagtgaacccaaagccaggaacattaagatatggtgcaattcaagatgaaccactt
tggattatattttctagagatatggttattaagttaaaagaagaattaatgttgaattca
ttcaagacaattgatggtagaggtgctagtgtacatattgctggtggtccatgtataact
atacaatatgttacaaatattattatacatggattaaatattcatgattgtaaacaaggt
ggaaatgcttatgttagagattcaccacaacattatggttggagaacaatatcagatgga
gatggtgtttctatatttggtggaagtcatgtttgggttgatcattgttctttgtcaaat
tgtaatgatggtttgattgatgcaattcgtggttctactgccattactatttccaataat
tatatgacacatcacaacaaggtaatgcttttgggacatagtgatacatttactagagac
aagaatatgcaagttaccattgcttttaatcattttggagaagggcttgtgcaaaggatg
ccaagatgtagacatggatatttccatgtggtgaataatgactacactcattgggagatg
tatgcaattggaggaagtgcttctccaactatcaatagtcaaggcaacagattccttgct
cctaatgatgtcttcaacaaggaggtgacaaaacatgaggatgcagcagaaagtgaatgg
aagaattggaattggagatcagaaggtgatttaatgcttaatggagcatttttcataaga
tctggtgctggagcttcttctagttatgctaaagcttcaagtttaagtgcaaggccatct
actttggttaattctattacaatgaatgctggtgcacttggttgcaaaaagggcaaaaaa
tgttga
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