Solanum stenotomum: 125866772
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Entry
125866772 CDS
T08385
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125866772
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125866772
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125866772
03036 Chromosome and associated proteins [BR:
sstn03036
]
125866772
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125866772
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125866772
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125866772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
HEAT_EF3_N
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
SCD
Cnd1
CLASP_N
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
125866772
NCBI-ProteinID:
XP_049403080
LinkDB
All DBs
Position
6:52716813..52723874
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGSQMRES
DLVDWFVPLVKRLAAGEWFTARVSACGLFHIAYSSAPEMLKTELRSIYSQLCQDDMPMVR
RSAATNLGKFAATVESAYLKSDIMSIFDDLTHDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPELAIQHILPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEHLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGIGFFDDKLGALCMQWLQDKVYSIRDAAANNLKRLAEEFGPEWAMQHIIPQV
LDMTTSPHYLYRMTILRSISLLAPVMGSEITCSKLLPVVVTATKDRVPNIKFNVAKVLQS
LIPIVDNSVVEKTIRPSLVELAEDPDVDVRFYANQALQSIDNVMMSG
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggtagatgagccattgtacccgatagctgtgttaatagatgaacttaagaat
gatgatatccaattgcggttaaattctattaggaggctatcaactattgcacgtgcactt
ggtgaggaaagaaccagaaaggagttgatcccctttttgagtgaaaacaatgacgacgat
gatgaagttttgcttgcaatggcagaagagttgggcgtgtttattccttatgttggaggt
gtggagcatgctcatgttcttctcccacctctagagaccctttgtacagttgaggagacc
tgtgtgagggataaagctgtggagtcattgtgtagaattggatcccagatgagggagagt
gatttagttgattggttcgtcccgcttgtgaagaggctagcagctggtgaatggttcaca
gcaagggtttctgcatgtgggctctttcatattgcttactcaagtgccccagaaatgttg
aaaacagaacttcggtctatttacagccaattgtgtcaagacgacatgcctatggtgcga
aggtcggctgctacaaacttggggaagtttgctgctacagttgaatctgcttacctgaag
agtgacatcatgtcaatatttgatgatcttacacatgatgatcaggattctgtgcgatta
ttagctgttgagggctgtgctgcacttggcaagctgttggagcctcaggactgtgtggca
catatcctgcctgtcattgtcaacttctctcaggacaagtcttggcgcgttcgatacatg
gttgctaaccagttgtacgaactatgtgaagctgtagggcctgagcccactaggacggat
ttggtgcctgcctatgtccgtttgcttcgagataatgaagctgaagttcgcatagctgct
gcaggaaaagtcaccaaattctgcaggattctcagtcccgagcttgctattcaacatatt
cttccctgtgtgaaggaattatcatcagactcttcacaacatgtcagatctgctttggct
tccgttataatggggatggctcctgttttgggaaaggatgcaaccattgaacatcttctt
ccaatatttctttcccttctgaaggacgagtttcctgatgtgcgcctgaacatcattagc
aagcttgatcaagtcaatcaggtgattggaattgatttattgtctcaatctctgttgcca
gctattgttgagctggcagaggacaggcattggcgagtccgtcttgcaataatagaatac
atacctctattggcaagtcaattgggcataggattttttgatgataagctgggtgctctt
tgcatgcaatggttacaggacaaggtttattcaattagagatgctgctgctaataacttg
aagcgtcttgcagaagaatttggtccagagtgggcaatgcagcatataattcctcaggtc
ttggatatgactaccagtccacattatttgtatcgaatgactattcttagatcaatttca
ttgcttgcaccagtaatgggttctgagataacttgttctaagttgctgcctgtggtagtt
actgctacaaaggatagagtgcccaacattaaatttaatgtggcaaaggtgttgcaatcc
cttatacctattgttgacaactcggtggtggagaaaaccattcggcccagtttagtagag
ctagctgaagaccctgacgtcgatgttcgcttttatgccaatcaagcactccagtcgatt
gataacgtcatgatgtcaggttag
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