Solanum stenotomum: 125866863
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Entry
125866863 CDS
T08385
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125866863
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125866863
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125866863
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125866863
03041 Spliceosome [BR:
sstn03041
]
125866863
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125866863
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
125866863
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125866863
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125866863
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125866863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
125866863
NCBI-ProteinID:
XP_049403191
LinkDB
All DBs
Position
6:59051718..59058892
Genome browser
AA seq
325 aa
AA seq
DB search
MDQNVLDDIITRLLEVKGKPGKQVVLTEAEIKQLCLVAKETFLRQPNLLELEAPIKICGD
IHGQYSDLLRLFEYGGLPPQSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGN
HECASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLNHLD
QIRNLQRPTDVPDAGLLCDLLWSDPSKDVQGWGMNDRGVSYTFGADKVTEFLEKHDLDLI
CRAHQVVEDGYEFFANRQLVTVFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKSK
FSFGSTTTAKPGSPTGMKSFFNSKA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggaccagaatgtgttggatgatataataactaggcttcttgaagtaaagggtaaacca
gggaagcaagttgtgttgactgaggctgagattaagcagttgtgtttggttgctaaagag
actttcttgagacagcctaatttgttggaacttgaagcccccatcaagatttgtggtgac
attcatggtcaatattctgatcttctgcggctttttgagtatggtggattgccgcctcaa
tcaaactatttatttttaggggattatgttgatcgtggcaagcagagcttagagactata
tgtcttctacttgcatacaagataaaatatcctgaaaacttcttcttgcttcggggaaat
cacgaatgtgcttccataaaccgcatatatggattttatgatgaatgtaagagaagattt
aatgttagattatggaaaatcttcacagattgcttcaattgtctgccggtcgctgcttta
atagatgaaaagattctatgtatgcatggaggcctctctcctgatttgaaccatttagac
caaatcagaaatctccagcgcccaactgatgtgccagatgctggtttgctctgtgatttg
ctttggtctgatcctagtaaagatgttcagggatggggaatgaatgaccggggagtttca
tacacttttggtgcagacaaggtgacagaatttcttgagaagcatgatctggatcttatt
tgccgtgctcaccaggttgtggaggacgggtatgagttttttgctaatcggcaacttgta
actgtattttctgcaccgaattattgtggagagtttgacaatgctggcgctatgatgagc
gtagatgagacattaatgtgctcctttcaaatattaaaacctgccgacaagaagtccaaa
ttcagctttggaagtacaactactgctaaacctggatctcctactggaatgaagtccttt
tttaattccaaagcatga
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integrated database retrieval system
