KEGG   Solanum stenotomum: 125866877
Entry
125866877         CDS       T08385                                 
Name
(RefSeq) protein SPA1-RELATED 4-like isoform X1
  KO
K26557  protein SPA1-related 3/4
Organism
sstn  Solanum stenotomum
Pathway
sstn04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    125866877
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sstn04121]
    125866877
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    125866877
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_IFT140_1st Pkinase Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF12 PK_Tyr_Ser-Thr NBCH_WD40 WD40_like
Other DBs
NCBI-GeneID: 125866877
NCBI-ProteinID: XP_049403213
LinkDB
Position
6:complement(56425879..56433511)
AA seq 872 aa
MWIVMEGSSQSGRERSESSRGLNSSGVVDWNSRFRSASTIRLSSDASHDSGFVSKEWERI
ESSDVNCFKDQGVRGIDRKDVSLRHWLDNPERTVDALECMHIFTQIVEIVKLAHTQGIAV
HNVRPSCFVMSSFNRVAFIESASCSDSGSDSCEDEPNSSSSPLQLEMIPGKDSAIASESS
CLQSSSGHMVQTLEVSKNRQEEENNKHTFPMKQILHLETNWYTSPEEVNDAPGTCASDIY
RLGVLLFELYCTFNSSDAKIANMSCLRHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPKV
GELLESEFLKTPRHDLEEREAAIELREKIDEQELLLEFLLLIQQKKQEAVENLHEIVSFL
TSDVEEAIKMQTTLKLKGGSSVEPAEEATEMQTPLKMKGGSSLEPAKHLNSRRTNITEDH
DSGSSGSRKRSRPSTGEESDGHPDESQKFERHIENKSSISAKSSRLMKNFRKLEAAYFMT
RRRVIKRDKSMSRNCQTSLECKSSATATERSSLSNMSSKGGCNGDRQRGWINSYLEGLCK
YFSFSKLEVKADLKQGDLLNPSNLVCSLSFDRDGEFFATAGVNKKIKVFEYNSILNADRD
IHYPVVEMANRSKLSSICWNGYIKSQLASSNFEGVVQVWDVTRSQLFMEMREHEKRVWSV
DFSLADPTMLASGSDDGSVKLWNINQGVSVGTIKTKANVCCVQFPVDSGRALAFGSADHK
IYYYDLRNSKLPLCTLIGHNKTVSYVKFIDSTTLVSASTDNTIKLWDLSTCTSRILDSPL
QSFTGHMNVKNFVGLSVSDGYIATGSETNEVVIYHKAFPMPALSFKFNCTDPLSGDEVDD
SAQFISSVCWRGQSPTLVAANSMGNIKLLEMV
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgtggatagtaatggagggttcatctcagtctggtagggagaggtctgagagttcaagg
ggtttgaatagttcaggtgttgtggattggaattcaagatttcgttctgcaagtactatc
aggttgtctagtgatgcatctcatgattctggatttgtttcaaaagagtgggaaagaatt
gagtcatctgatgttaattgctttaaagatcaaggggttcgaggaatcgatcgtaaagat
gttagtttgaggcattggttggataatccagagagaactgttgatgctcttgaatgtatg
catatatttacacaaattgtagagattgtaaaactcgcacatactcaagggatagccgtt
cataatgtgcggccatcatgttttgttatgtcttcatttaaccgtgttgcgtttattgaa
tctgcttcctgttctgattcgggatcggattcatgtgaagatgaaccaaacagttcatct
tcacctttgcaacttgagatgattcctgggaaggactctgctatagcatctgaaagcagt
tgcttgcagtcaagttcaggtcatatggtgcagactttggaagttagtaagaatagacaa
gaggaagaaaacaacaagcatacttttccaatgaaacagatattgcacttggaaactaat
tggtatactagtccagaagaggttaatgatgctccaggcacttgtgcttcagacatttat
cgactcggagtgcttctatttgagctatactgcaccttcaactcatcagatgcgaaaatt
gcaaatatgtcatgtctaagacatcgtgtcctacccccacagttgttgttgaaatggcct
aaggaagcttcattttgcttatggttactacatccggatccaagtagtcggccaaaagtg
ggtgagttgctagaaagtgagttccttaaaactccaagacatgacttggaagaacgtgaa
gcagcaatagagcttagagaaaaaatagatgagcaggaattattgctggagttccttttg
ctaatccaacagaaaaagcaggaggctgtggaaaatttgcacgaaatcgtgtctttttta
acgtctgatgtagaagaggccattaagatgcagacaaccctcaagttaaaaggaggctca
agcgtagaaccagcagaagaggccactgagatgcagacaccccttaagatgaaaggaggc
tcaagcttagaaccagctaagcatttgaattctcggaggacaaatattactgaagatcat
gattcagggagctctggatctagaaagaggtctaggcccagcacaggtgaggagtctgat
ggccatccagatgaaagccagaaattcgaaaggcatattgaaaataaaagcagcatttcg
gcaaaaagttcccggttgatgaaaaacttcagaaaattggaggcagcttatttcatgacg
agacgcagggttattaaaagggacaaatctatgagtagaaactgtcaaacaagtctggaa
tgtaaaagttctgctacagctactgaaaggagttctcttagtaatatgtcatcaaaggga
gggtgcaatggtgatagacagaggggatggatcaattcgtacttggagggtctatgcaag
tacttttcctttagcaagttagaagtgaaggcagatttaaagcaaggggatcttctaaac
ccttccaatcttgtatgttctctcagctttgatcgtgatggtgaattttttgcaactgct
ggtgtaaataagaagatcaaagtttttgaatataactcaattctaaatgcggatcgtgat
atacactatccagtcgttgaaatggctaatagatcaaagttaagcagtatatgctggaat
ggctatatcaaaagccagcttgcctcaagtaactttgaaggtgtggtgcaggtatgggat
gtcacaagaagtcagcttttcatggagatgagagagcatgagaaacgcgtctggtctgtt
gatttttctttagcagatccaaccatgttggcaagcgggagcgatgatggttctgtgaag
ctttggaatatcaatcagggagtcagtgttggaaccataaaaacaaaagccaatgtctgc
tgtgttcagttccctgttgattcaggacgggcccttgcttttggttcagcagatcataag
atatattactatgacctacgaaactcaaagttgcctctatgcacattaattgggcacaac
aagacagtgagctacgtcaagttcatagattcaacaactcttgtgtcagcgtctacggat
aatacaataaagctgtgggatctgtcaacatgcacgtctcgtattctcgattctcctctt
cagtcatttactggacatatgaatgtaaagaactttgttggcctatctgtatctgatggt
tacatagcaactggctcagagacaaatgaggttgtcatctaccacaaagcttttcccatg
ccagcattgtcatttaaatttaactgcacagatccactttctggtgatgaagtggatgac
agtgcacagttcatctcatctgtgtgttggcgtggtcagtcccctaccttagttgccgca
aattctatgggaaatatcaagctcttggagatggtatga

DBGET integrated database retrieval system