KEGG   Solanum stenotomum: 125866950
Entry
125866950         CDS       T08385                                 
Name
(RefSeq) protein SLOW WALKER 1
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
sstn  Solanum stenotomum
Pathway
sstn03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    125866950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sstn03009]
    125866950
Ribosome biogenesis [BR:sstn03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    125866950
SSDB
Motif
Pfam: UTP15_C WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Utp13 WD_LRWD1 ANAPC4_WD40 Utp12 Beta-prop_DCAF4 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 125866950
NCBI-ProteinID: XP_049403299
LinkDB
Position
6:complement(53688163..53690021)
AA seq 533 aa
MAETQSIARTFPVKPKLKPTSANSSTPTPESKYWKSFKTPKEIQTPQTLVSSINSIVFSP
TSPHDFAAAHSATVSIYSGKTLEPKTTISSAFRDTVTSASFRSDGRLIAAGDLSGAVQVL
DLKTRVPLRRLRGHTRPVRVVRYPRVDKLHLFSGGDDAIVKYWDITTESKIYDLLGHKDY
VRCGDASPVSDDMFVSGSYDHTVKVWDVRVMNSGSVMEFDHGKPVEDVIYLPSGGLVATA
GGNSVKIWDILGGGKLLCTMESHNKTVTSICVGKIGKESGEEAQQYRILSVALDGYMKVF
DYAKFKITHSMRFPNPLMSVGFSPDCSTRVIGASNGTLYIGRRKVKESESMELVDVGGFG
QVEEPQRRVLRPSYYRYFLRGQSEKPSEWDYLIKKPKKIKVTEHDKLLKKFMHKEALLAA
LNGKNPANVVAVMEELVARKKLMRCVSNLETEELGLLLKFLQRYSTMPRFSRFLMGLTKK
VVEMRAEDIKSSDELRGNIRNLKRDVEEEIRLQQTLLQIQGIVTPLLKIAGRR
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggctgaaactcaatcgatagcaagaactttcccagtgaagccaaagttgaaacccact
tcagcaaattcatctacaccaacccctgaatccaagtactggaaatccttcaaaacccct
aaagaaattcaaaccccacaaacacttgtttcttcaatcaactccatagtcttctctcca
acatctcctcacgatttcgccgccgcccattccgccaccgtttccatttactccggcaaa
actcttgaacccaaaacaaccatctcctctgctttccgtgatactgtcacttccgcttca
ttccgatccgatggtcgtcttatcgctgctggtgacctttccggcgccgttcaagttctc
gacctcaagacccgtgtcccacttcgtcggcttcgtggccatacccgacctgttcgtgtt
gttcgttacccgcgggttgataagcttcaccttttctccggtggggatgatgctattgtt
aagtattgggatattactactgagtcaaaaatttacgatcttttggggcataaggattac
gtgaggtgtggagatgcttctcctgtaagtgatgatatgtttgtttctgggtcttatgat
catacagtgaaagtttgggatgttagggtgatgaattcgggttcggtgatggagtttgac
catggaaagcctgttgaggatgtgatttacttgccatctggtgggttagttgctactgct
ggtggaaattctgtgaagatttgggatatactcggaggtgggaaattgctatgtacaatg
gagagtcacaacaagactgttacttcgatttgtgttggtaaaattgggaaggagagtggt
gaggaggcgcagcaatatcggattttgagtgtggctttggatggatatatgaaggtgttt
gattatgccaagttcaaaattactcattcgatgaggtttccgaatcctctaatgtctgtt
gggttctcgcctgattgttctacaagggtgattggggcatcaaatgggacattgtatata
ggcaggagaaaggtgaaggaaagtgaaagcatggaacttgttgatgttggtggctttggt
caggtagaagaacctcagaggcgagtgttgaggccatcttattacagatattttctgcgg
gggcaaagtgagaagccctctgaatgggattacttgattaagaagccgaagaagataaag
gtgacggagcatgataagttgttgaagaagtttatgcacaaggaggctttgttagctgct
ttgaatgggaagaacccagcaaatgtggtagctgttatggaggaattggttgctcggaag
aagttgatgagatgtgtatcaaacttggaaacggaagaacttggtttgcttttgaagttt
ctgcagagatattcaaccatgcctagattttcaaggtttttgatgggcctgacaaagaaa
gtagttgagatgcgagctgaagatatcaaatcatcggatgaactgcgaggtaacattaga
aatcttaaacgagatgtggaggaggaaatacgattacaacagacattgctacagatacag
ggcattgtgactcctctgctcaagattgctggaaggagatga

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