Solanum stenotomum: 125866950
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Entry
125866950 CDS
T08385
Name
(RefSeq) protein SLOW WALKER 1
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
sstn
Solanum stenotomum
Pathway
sstn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125866950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sstn03009
]
125866950
Ribosome biogenesis [BR:
sstn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125866950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
Utp13
WD_LRWD1
ANAPC4_WD40
Utp12
Beta-prop_DCAF4
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
125866950
NCBI-ProteinID:
XP_049403299
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Position
6:complement(53688163..53690021)
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AA seq
533 aa
AA seq
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MAETQSIARTFPVKPKLKPTSANSSTPTPESKYWKSFKTPKEIQTPQTLVSSINSIVFSP
TSPHDFAAAHSATVSIYSGKTLEPKTTISSAFRDTVTSASFRSDGRLIAAGDLSGAVQVL
DLKTRVPLRRLRGHTRPVRVVRYPRVDKLHLFSGGDDAIVKYWDITTESKIYDLLGHKDY
VRCGDASPVSDDMFVSGSYDHTVKVWDVRVMNSGSVMEFDHGKPVEDVIYLPSGGLVATA
GGNSVKIWDILGGGKLLCTMESHNKTVTSICVGKIGKESGEEAQQYRILSVALDGYMKVF
DYAKFKITHSMRFPNPLMSVGFSPDCSTRVIGASNGTLYIGRRKVKESESMELVDVGGFG
QVEEPQRRVLRPSYYRYFLRGQSEKPSEWDYLIKKPKKIKVTEHDKLLKKFMHKEALLAA
LNGKNPANVVAVMEELVARKKLMRCVSNLETEELGLLLKFLQRYSTMPRFSRFLMGLTKK
VVEMRAEDIKSSDELRGNIRNLKRDVEEEIRLQQTLLQIQGIVTPLLKIAGRR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaactcaatcgatagcaagaactttcccagtgaagccaaagttgaaacccact
tcagcaaattcatctacaccaacccctgaatccaagtactggaaatccttcaaaacccct
aaagaaattcaaaccccacaaacacttgtttcttcaatcaactccatagtcttctctcca
acatctcctcacgatttcgccgccgcccattccgccaccgtttccatttactccggcaaa
actcttgaacccaaaacaaccatctcctctgctttccgtgatactgtcacttccgcttca
ttccgatccgatggtcgtcttatcgctgctggtgacctttccggcgccgttcaagttctc
gacctcaagacccgtgtcccacttcgtcggcttcgtggccatacccgacctgttcgtgtt
gttcgttacccgcgggttgataagcttcaccttttctccggtggggatgatgctattgtt
aagtattgggatattactactgagtcaaaaatttacgatcttttggggcataaggattac
gtgaggtgtggagatgcttctcctgtaagtgatgatatgtttgtttctgggtcttatgat
catacagtgaaagtttgggatgttagggtgatgaattcgggttcggtgatggagtttgac
catggaaagcctgttgaggatgtgatttacttgccatctggtgggttagttgctactgct
ggtggaaattctgtgaagatttgggatatactcggaggtgggaaattgctatgtacaatg
gagagtcacaacaagactgttacttcgatttgtgttggtaaaattgggaaggagagtggt
gaggaggcgcagcaatatcggattttgagtgtggctttggatggatatatgaaggtgttt
gattatgccaagttcaaaattactcattcgatgaggtttccgaatcctctaatgtctgtt
gggttctcgcctgattgttctacaagggtgattggggcatcaaatgggacattgtatata
ggcaggagaaaggtgaaggaaagtgaaagcatggaacttgttgatgttggtggctttggt
caggtagaagaacctcagaggcgagtgttgaggccatcttattacagatattttctgcgg
gggcaaagtgagaagccctctgaatgggattacttgattaagaagccgaagaagataaag
gtgacggagcatgataagttgttgaagaagtttatgcacaaggaggctttgttagctgct
ttgaatgggaagaacccagcaaatgtggtagctgttatggaggaattggttgctcggaag
aagttgatgagatgtgtatcaaacttggaaacggaagaacttggtttgcttttgaagttt
ctgcagagatattcaaccatgcctagattttcaaggtttttgatgggcctgacaaagaaa
gtagttgagatgcgagctgaagatatcaaatcatcggatgaactgcgaggtaacattaga
aatcttaaacgagatgtggaggaggaaatacgattacaacagacattgctacagatacag
ggcattgtgactcctctgctcaagattgctggaaggagatga
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