Solanum stenotomum: 125867003
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Entry
125867003 CDS
T08385
Name
(RefSeq) AP-1 complex subunit gamma-2-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
sstn
Solanum stenotomum
Pathway
sstn04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
125867003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125867003
Membrane trafficking [BR:
sstn04131
]
Endosome - Golgi transport
Others
AP-1 complex
125867003
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_GCN1
HEAT_2
INTS7_N
PDS5
SUV2_M
Motif
Other DBs
NCBI-GeneID:
125867003
NCBI-ProteinID:
XP_049403371
LinkDB
All DBs
Position
6:45747915..45767186
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AA seq
879 aa
AA seq
DB search
MNPFSSGTRLRDMIRAIRASKTAAEERAVVRKECAAIRAAISDNDHDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSIKQDLNHTNQY
IVGLALCALGNIGSAEMARDLAPEVERLLKFRDPNIRKKAALCSIRIIKKVPDLAENFIH
AAASLLSEKHHGVLITGVQLCIDLCKISTEALEHFRKKCTDGLVKLMRDLANSPYAPEYD
VSGITDPFLQIRLLRLLRSLGKDDADASDTMNDILAQVATKTESNKNAGNAILYECVAAI
MSVEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKALAVDSQAVQRHRTTILECVKD
SDPSIRKRAVELVYLLVNESNVKPMTKELIEYLEASDPEFRGDLTAKICSIVEKFSPEKI
WYIDQMLKVLSEAGNDVKDEAWHSLIVVITNASDLHGYAVRSLYRAVQAAGEQETLVRVA
IWCIGEYGDMLVNNAGRLDIEEPLTVTESDAVDVVETSFKSHSFDLTTRAMCLIALLKLS
SRFPSCSQRINDIIVQYKGSFVLELQQRAIEFNSIIGRHQNIRPSLVERMPVLDEATHSG
RKAGSVPAVVSTSQGVSVNLPNGVAKPSAAPLVDLLDLSSDDVPAPSSSGGDFLQDLLGV
DLVPMSSQSGTNQAQMSGTNVLLDLLSIGTPPANSSPSTIQVSPSNVDTKSPVDLLDRLS
SPSAPLVQVSTTAGSSPMLDLLNGFPSSSPIAVTEGNGPAYPSIVAFESSSLKLTFNFSK
KPENPQTTLIEASFTNKSGEVLTNFIFQAAVPKFLQLHLDPASGNMLPANSSGSIMQKLK
LTNSQHGKKSLVMRIRIAYKVNNKDVLEEGQVNNFPRDL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttttcgtccggtacacgtcttagggacatgattcgggctatccgtgctagc
aaaactgcagcagaggagcgtgctgtagtaagaaaagagtgtgctgctatcagagctgca
atcagtgataatgatcatgactacagacatcgtaatcttgcaaaactaatgttcattcac
atgctgggttatcctacacactttggtcaaatggaatgcttgaagctgattgcttctcca
ggatttccagagaaaagaataggatatcttggcctaatgttgcttcttgacgaaagacaa
gaggttctaatgttggttacgaattctataaagcaagatcttaaccacaccaatcaatat
attgttggacttgctctttgtgcattagggaatattggttctgcagaaatggctcgtgac
cttgcaccagaagttgaacggttgctaaagtttagagatcctaatatccgaaagaaggca
gcactttgctctataagaattataaagaaggtccccgatcttgccgaaaattttatacac
gctgcagcttccttgttaagtgagaagcaccatggagttctcattactggtgtccagctt
tgtatagatctatgtaaaattagtacagaggctcttgaacatttcagaaagaaatgcacg
gatggtttagtcaaacttatgagggatctcgcaaacagtccatatgcgcctgagtatgac
gtttctggcattacagatcctttccttcaaataagattgcttaggctcttgcgttctttg
gggaaagatgatgccgatgccagtgatactatgaatgatattctagctcaggtggcaaca
aaaactgaatcaaacaaaaatgcaggcaatgctattctttatgaatgtgttgcagctatc
atgagtgtagaagataatggtggcttgagggtgcttgctattaacattttgggaagattt
ttatccaaccgtgataacaatatcagatatgttgcactgaacatgttgatgaaagcttta
gctgtagatagtcaagcagtgcagaggcatcggacaacaattttggaatgtgtgaaggat
tccgatccatcaattcgtaaaagagccgttgaacttgtgtatctcttagtaaacgaaagc
aatgtgaagcctatgacgaaggagttaatagaatatctagaagcaagtgatccggagttt
aggggagatctcactgcaaaaatctgttccattgtggaaaagttctcacctgagaaaatt
tggtacattgatcagatgctcaaggttctctctgaggctggaaatgatgtgaaggatgag
gcgtggcattctctgattgtggtgattacaaatgcttccgacctccatggttatgcagta
cgttctctatacagagcagtgcaagcagcaggggaacaggaaactctggttcgagttgca
atttggtgcattggagaatacggtgacatgttagtaaacaatgctggaaggcttgatatt
gaagaacccttgaccgtaacagaatctgatgctgtggatgttgtggagacttcctttaag
agccattcatttgatctcactactcgggcgatgtgtttgattgctttgctaaagctgtca
agtcgctttccatcttgttcacagcggataaatgacatcattgtccagtacaaagggagt
tttgtgcttgaactgcaacagagagctattgaatttaactcaataattgggaggcatcag
aatatcaggccttcacttgtagaaagaatgccagttcttgatgaagcaacccacagcgga
aggaaggctggttctgtaccagcagttgtgtcaacatctcaaggagtatcagtcaatctt
ccaaatggagttgccaagcccagtgctgcccctcttgttgacttacttgatcttagttca
gatgatgttcctgcacctagctcttctggtggagactttcttcaggatcttcttggtgtt
gatctggtgccaatgtcttcacaatcaggtacaaatcaggcccaaatgagtggcaccaat
gttttactggatcttctgtcaattggaacaccacctgcaaatagcagcccatctacaatt
caggtgtcaccctccaatgttgacactaaaagtccggtggatctattagatagattgtcc
tcaccttctgctcctttagttcaagtctctactacagctggaagttctcctatgttggat
ttattgaatgggttcccttccagctcaccaattgctgttacagaaggaaatggtcctgca
tatccatcaatagttgcatttgagagcagctcgttaaaattaacattcaacttctcaaag
aagcctgaaaacccacagacaacacttattgaagctagttttacaaacaagtcgggggaa
gttctcacaaactttattttccaagctgcagttccaaagtttcttcaattgcacttggat
ccagcaagtggtaacatgttacctgcaaatagtagtggatcaatcatgcaaaagttgaaa
ctcacaaacagccaacatggcaagaaatcccttgtcatgcgcatacggatagcttataag
gtgaataataaggatgtattggaggaaggccaagtcaacaattttccccgtgatttgtga
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