Solanum stenotomum: 125867108
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Entry
125867108 CDS
T08385
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
sstn
Solanum stenotomum
Pathway
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125867108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125867108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125867108
Membrane trafficking [BR:
sstn04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
125867108
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125867108
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125867108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank
BAR
PH
Ank_2
Ank_5
Ank_3
Ank_4
PH_11
PH_8
PH_20
BAR_2
ANK_LRRK2
PH_13
Motif
Other DBs
NCBI-GeneID:
125867108
NCBI-ProteinID:
XP_049403492
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All DBs
Position
6:34778337..34789125
Genome browser
AA seq
815 aa
AA seq
DB search
MHFGKLDDSPMFRKQLQCFEESAESLRERSLKFYKGCRKYTEGLGEGYDGDIAFASALET
FGGGHNDPISVAFGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLQFVNIDLQDVKE
ARKRFDKASLIYDQAREKFLSLRKGTKSDVASLLEEELHNARSTFEQARFSLVTALSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEKAALNEK
MQEYKRQVDRESRWLSNGSNGSPNGDGIQAIGRSSHKQIEAVMQSAARGKVQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQNTKPSGSGSQHSGQRNSSELGSGLLSRWLSS
HYHGGVHDEKSVAHHTVNLLTSTIKVDADQSDLRFCFRIISPTKSYTLQAESALDQMDWI
EKITGVIASLLSSQAPDRCLTASPMGSGHHRSASESSSFESSDFDPPAVEDHPSDRLISA
HHDRPFRNSQQLRSAPKTEQPIATLRRVCGNDRCADCGAAEPDWASLNLGVLVCIECSGV
HRNLGVHISKVRSLTLDVKVWEPSVIALFQSLGNTFANSVWEESLQARGAFQVSAASSYR
SDKQQQLYISKPSHADPISTKEKFIHAKYADKSFVRRTKDGHTAAQMMWEAVRANDKKAV
YRLIVSSEADVNALYKQVVSNSSLTLAKVMLLQEQPYTDQNSTCLEMDLASPSERLIVGD
FDGCSLLHLACETADLGMLELLMQYSANVNASDSSGQTPLHWCIIRGKAAFAKLLLARGA
DPHALDGESKTPYDLALGSNFDDVDVLNLLSDANA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcattttggtaaactcgatgactctcccatgttccgtaaacagctgcaatgttttgaa
gaaagtgctgaatcactaagagaaagaagcttgaaattctataaaggatgtcgaaaatat
acggaaggacttggagagggatatgatggagatattgctttcgcgagtgccctggaaaca
tttggtggggggcacaatgatcccatcagtgttgcatttggaggtcctgtaatgactaaa
tttactattgcactgagggaaattgggacttataaggaagttcttcggtcacaggttgag
cacatgctgaatgatcggttactgcagtttgttaacatagatctgcaagatgtcaaggaa
gctcggaagcgctttgacaaggcaagcctaatttatgatcaggcccgcgagaagtttttg
tcactaaggaaaggcacaaaaagtgatgttgccagtttactggaggaggaacttcataat
gcaagatcaacttttgagcaagctcgattcagtttggtaaccgctctttccaatgttgaa
gcaaagaaacggtttgaattcctggaagcagttagtggtacaatggatgctcatcttcgt
tatttcaaacagggatatgagcttttgcatcagatggagccatatatcaatcaggtcctg
acttacgcacagcagtctcgagaacgctccaactatgagaaggcagctcttaatgaaaag
atgcaagaatacaagagacaagtagatcgagagagcaggtggttgtccaatggttctaat
ggatctcctaatggagatggtatacaagccattggcagaagttcacacaagcaaatagaa
gctgtcatgcaatctgctgcaaggggaaaggttcaaaccattagacaaggttatctatca
aagcgctcatcaaatttgcggggagactggaaaagaaggttctttgttcttgatagccgt
ggaatgttgtactactatcgcaaacagaacacaaaaccatctgggtcaggtagtcaacat
tctggccagagaaatagttcagagcttggttctggacttcttagtcgctggctttcgtcc
cattatcatggtggtgtacatgatgaaaagtctgttgctcatcatactgtaaaccttttg
acatcaactataaaggttgatgctgaccaatcagatctgcggttttgcttcaggattatc
tcccctacaaagagctacaccttgcaggcagagagtgccttggaccaaatggattggatt
gagaaaataacaggagttattgcttctttgttgagttctcaggcccctgacaggtgtttg
actgccagtcctatgggaagtggtcatcatcgatctgccagtgagagcagttcatttgaa
agttcagattttgacccacctgcagttgaagaccatccatctgacaggcttatctcagca
catcatgatcgccctttcagaaattcacaacagctacgatctgctccaaaaactgaacag
ccaattgccacactacgtagagtatgcgggaatgatagatgcgctgactgtggtgctgct
gaaccagattgggcatctctaaatcttggtgttcttgtttgtattgaatgttcaggtgtt
catcgtaatcttggtgtgcatatatcaaaggtgaggtcactcacacttgatgtcaaagta
tgggagccttctgttatagctttatttcagtcgttggggaatacctttgcaaattcagtc
tgggaggagtcactgcaagctcgaggtgctttccaagtctccgctgccagctcatacaga
tctgataaacagcaacagctctacatcagcaagccaagtcatgctgatcccatttcaacc
aaggagaaattcatccatgcaaagtatgcagataaatcatttgttcgtcggacgaaggac
ggtcacactgcggcacaaatgatgtgggaggcagttcgagctaatgataagaaagctgtg
tatcgccttattgtaagctctgaagcagacgttaatgctctttacaagcaagttgtgtct
aattcttccttaacccttgccaaagtaatgctgttacaagaacaaccatacactgatcag
aattctacttgcttagaaatggacttggcaagtccaagtgagaggcttatagttggggac
ttcgatgggtgctcccttctacaccttgcttgtgaaacagctgacctagggatgctagag
cttcttatgcaatacagtgcaaatgtaaatgcttcagattcaagtggtcagacaccactt
cattggtgtattataagaggcaaagctgcatttgctaagttgcttcttgcaaggggtgct
gatccacatgctttggatggggaaagtaaaaccccttacgatcttgcattgggctcaaat
tttgatgacgttgatgtccttaatctcttgtcagacgcaaatgcttaa
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