Solanum stenotomum: 125867132
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Entry
125867132 CDS
T08385
Name
(RefSeq) eukaryotic initiation factor 4A-15
KO
K03257
translation initiation factor 4A
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125867132
03012 Translation factors [BR:
sstn03012
]
125867132
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125867132
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
125867132
mRNA cycle factors
Stress granule specific factors
125867132
Translation factors [BR:
sstn03012
]
Eukaryotic type
Initiation factors
eIF-4
125867132
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125867132
Exosomal proteins of bladder cancer cells
125867132
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Flavi_DEAD
DUF2780
Motif
Other DBs
NCBI-GeneID:
125867132
NCBI-ProteinID:
XP_049403521
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All DBs
Position
6:complement(23782418..23785477)
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AA seq
414 aa
AA seq
DB search
MAGSAPEGSQFDARQFDSKMNELLSADDGQDFFTSYDEIYDSFDAMGLQENLLRGIYAYG
FEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLNYELLECQALVLAPTRE
LAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLR
PDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMNKPV
RILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKM
RSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQ
PENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQRFYNVVIEELPANVADLL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctcagccccagaaggatcacagtttgatgctcgtcaattcgactcaaaaatg
aatgagttgctttcagctgatgatggccaagatttctttacctcatacgatgagatttat
gatagttttgatgccatgggtttgcaggagaaccttctcaggggcatttatgcatacggt
tttgagaaaccctccgcaatccagcaaagaggaattgtacccttttgcaaaggtcttgat
gtaattcaacaggctcagtctggaactgggaagactgccacattttgttctggaattctg
cagcaacttaactatgaacttctggaatgtcaagctttggtcttggcacctactcgggag
cttgcacaacaaattgaaaaggtcatgagggcactaggtgactaccttggtgtcaaggta
catgcctgtgtgggaggaaccagtgttcgggaggatcaacgcatcctttcaagtggtgtt
catgttgttgtgggaacacctggacgtgtatttgacatgctgagaagacagtcacttcgc
cctgatcatataaagatgtttgtattggatgaggctgatgaaatgctttctagaggcttc
aaggatcagatctatgatattttccagctcttgcctcctaagattcaggttggtgtcttc
tctgctactatgccccctgaggcacttgaaatcacaagaaaattcatgaacaaacctgtg
aggattcttgtgaagcgtgatgagctgacgttagaaggtatcaagcagttctatgtgaat
gtggacaaggaagaatggaagcttgaaaccctgtgtgacctgtatgaaacattagccatt
acccagagtgtgatctttgtgaatactcgtcgcaaagttgactggttgacagacaagatg
cgaagcagagaccatacagtgtcagctacccatggtgacatggaccagaacactagagat
attataatgcgtgaattccgttctgggtcctcgcgtgttctcatcaccactgatcttttg
gcgcgaggaatcgatgtccaacaagtctcgctggtcataaattatgatctcccgactcag
cctgagaattatcttcatcgtattggacgcagtggaaggtttggtaggaagggtgtggcc
atcaactttgtaacaaaggatgatgagaggatgctgtctgatattcagagattttacaac
gttgttattgaggagctgccagcaaatgttgctgatctcctgtaa
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