KEGG   Solanum stenotomum: 125867195
Entry
125867195         CDS       T08385                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sstn  Solanum stenotomum
Pathway
sstn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125867195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sstn03019]
    125867195
   03041 Spliceosome [BR:sstn03041]
    125867195
Messenger RNA biogenesis [BR:sstn03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125867195
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125867195
Spliceosome [BR:sstn03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125867195
SSDB
Motif
Pfam: RRM_1 RRM_7 Hirudin
Other DBs
NCBI-GeneID: 125867195
NCBI-ProteinID: XP_049403579
LinkDB
Position
6:56056333..56059205
AA seq 443 aa
MDLMKKRKLEDNGVVTDVPVASRLSIEDARKILESVTSDQMLEILQNAVVRHTDVLDQVR
EISDRDATKRKLFVRGLGWETTTEKIRSIFGTFGELEEAVVILDKNTGKSKGYGFVTFKH
VDGALLALKQPSKHIDGRVTVTQLASAGIQGGPGGGSSNNPVDVSLRKIYVSNVPYDMQS
ERILQHFLMYGEIEEGPLGFDKATGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCK
LAIDGKKKPGVGGTGGPQVQTDGHGDPMGPGQYGAPSGYGGFSGHSSYGGYGHGPNSALG
SGNGIGVGGPGGSSYGNQSVGGGYGSGIGGPYGGGSHYGGAGYGGLTGGATAGGGGYSGA
GALGGAGGGLPGAGSTLGGAGRGSSMYGQPPSSAGMPSGDYPQQGSHYGSLHQPHGLQNQ
GPGASAAPRVAPGGMYQGMHSYY
NT seq 1332 nt   +upstreamnt  +downstreamnt
atggacttgatgaagaagaggaagcttgaggacaacggcgtcgtcactgacgttcctgtt
gcgagtaggctttcaatcgaagatgcccggaagattcttgaatctgttacatctgatcaa
atgttagaaatcttacagaatgctgtcgttcgtcataccgacgtgcttgaccaagttcga
gaaatctccgatcgtgacgctactaaaagaaagctctttgttcgtgggcttggctgggaa
actaccactgaaaaaatcaggtcaatttttggaacattcggtgagttagaagaagctgtt
gttattcttgataaaaatactgggaagagcaaaggttatggatttgttacgtttaagcat
gttgatggagctttacttgcgttaaagcaaccgagtaaacacattgatggtcgagttacg
gttactcagcttgcttcagctgggattcaaggtgggcctggtggtgggagttcgaataat
ccagtggatgtgtcgttgaggaagatttatgtatctaatgtgccgtatgatatgcaatcc
gagaggattttacagcattttttgatgtatggggagattgaggaagggccgttagggttt
gataaggccactgggaagtcaaaagggtatgctttgtttgtgtacaagacagcggaggca
gcacagtcttcgttggtggatcctgttaagaatattgatgggcatcagttgaactgtaag
ctggctattgatgggaagaaaaagcctggtgtaggaggtacaggaggacctcaggtccaa
acagatggacatggtgatccgatgggtcctgggcaatatggtgcgcctagtggttatggt
ggattttcagggcattcttcatatggcgggtatggacatggtcccaattcggcattgggt
agtggaaatggtatcggtgtgggtggtcctggtggttcatcttatgggaaccaatctgtg
ggtggtgggtacggttcagggattggtggtccatatggtggggggtctcattatggtgga
gctggatatggcgggttgaccggtggtgctactgctggcggtggtggttatagcggtgct
ggggcattgggaggtgctggtggtggattacctggcgctggtagtacattaggtggtgct
ggccgtggatcttcaatgtatgggcaacccccaagctcagctgggatgccatcgggagat
tatccacaacagggttctcattacggttctttacatcaacctcacgggctacaaaaccaa
ggccctggggcatcagctgcacctagagttgcacctgggggtatgtaccaggggatgcat
tcatattactga

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