Solanum stenotomum: 125867245
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Entry
125867245 CDS
T08385
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
sstn
Solanum stenotomum
Pathway
sstn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125867245
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125867245
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125867245
03036 Chromosome and associated proteins [BR:
sstn03036
]
125867245
Protein phosphatases and associated proteins [BR:
sstn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
125867245
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
125867245
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
125867245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Herpes_glycop_H
Motif
Other DBs
NCBI-GeneID:
125867245
NCBI-ProteinID:
XP_049403627
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All DBs
Position
6:58645118..58651820
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AA seq
475 aa
AA seq
DB search
MFKIIKRGKKSSKGDAVEPPIPSSLPNAPVDHASRIATSAVASQHVTLANATPDPSVVEV
LPLLKEVALSERHVLFIRKLQICCVQFDFSDTVKCARQKEIKRQTLTELIDLVQSGSCKM
NEIMQEELVRMISTNLFRCLPPASHENTGSEGIEEEDDMYLDPSWPHLQLVYELLLRYVM
STEMDTKVAKRYLDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRNGINN
VFYRFIFETERHNGIGELLEILGSVINGFALPMKEEHKLFLVRALIPLHKPKCVSAYHHQ
LSYCITQFVEKDYRLADIVIRGLLKYWPITNCGKEVLFLNELEEVLEGTQPAEFQRCLVP
LFKQLGRSINSPHFQVAERALFLWNNEHIVDLIAQNRRAILPIIFEPLERNMYGHWNQAV
HGLTSNVRRMFLEMDSELFEECEKEYNEKAAGASGLVEQRERAWKKLEEAASMVG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagataataaaaagagggaagaaaagctccaaaggggatgctgtggagcctccg
ataccgagttcattgcctaatgcgcctgttgatcatgcttcgcgaatagcaacgtctgct
gtggcgtcacagcatgttactttggcaaatgccacaccagatcctagtgtggttgaagtt
ttgcccttattgaaggaggttgctctttccgaacgtcatgttttgtttatccggaagctc
caaatttgctgcgtgcaatttgacttctcggatacggtgaagtgtgctagacaaaaggag
atcaagagacaaacactcacagagcttattgatttagttcaatcaggttcgtgtaaaatg
aatgaaataatgcaggaagagttggttaggatgatatctaccaaccttttccggtgcctg
cctcctgcttcgcatgagaatactgggtcggaaggtattgaggaagaggatgacatgtat
ctggatccatcatggcctcatttgcaactagtgtatgagttacttttaaggtatgtgatg
tcaactgagatggataccaaggttgccaagcgatatcttgaccactcatttgtgctgaaa
ctgctcgacttgtttgattcagaggatcctagagagcgggagtatttgaagactatcctt
caccgcatatatgggaaattcatggttcataggccatttataaggaacgggataaacaat
gtattctacaggtttatatttgagacggagaggcataacggtatcggtgaattgctagag
attcttggaagtgtaataaatggatttgctctaccaatgaaagaagagcacaagttgttt
cttgttcgggcacttattccactccacaagcctaaatgtgtttctgcatatcaccatcag
ctgtcctactgcattactcagtttgttgagaaagattaccgattggcagatatcgtcatc
agggggctactaaaatattggccaattactaattgcggaaaggaggttctctttctcaat
gaactggaagaagttctggaaggtacacagcctgctgaatttcagcgctgtttggttccc
cttttcaagcaacttggacgaagcatcaatagtccccattttcaggttgctgagcgagct
ctgttcttatggaacaatgagcatatagtagacttgatcgctcagaatcgacgtgcaatt
ttgccaatcatctttgagccattagaaaggaatatgtatggtcactggaatcaggcagtc
cacgggttgacctctaatgtccggagaatgttcttggagatggattcagaactttttgag
gagtgtgaaaaggaatacaatgaaaaggcagctggtgccagcggccttgtggagcagcgt
gagcgagcttggaaaaaattggaagaagctgcttcaatggtcgggtag
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