KEGG   Solanum stenotomum: 125867301
Entry
125867301         CDS       T08385                                 
Name
(RefSeq) uncharacterized protein LOC125867301
  KO
K03873  elongin-B
Organism
sstn  Solanum stenotomum
Pathway
sstn04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125867301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sstn04121]
    125867301
   03400 DNA repair and recombination proteins [BR:sstn03400]
    125867301
Ubiquitin system [BR:sstn04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul2 complex
    Adoptor protein
     125867301
   Cul5 complex
     125867301
DNA repair and recombination proteins [BR:sstn03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     125867301
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N T2SSL Ubiquitin_2
Other DBs
NCBI-GeneID: 125867301
NCBI-ProteinID: XP_049403699
LinkDB
Position
6:complement(58274886..58282105)
AA seq 93 aa
MAMYIRVKRNKTTYFIQCDPTETILQMKEKLSNLIDQPANDQQLVLLPAGDVLEDSKSLA
DQKVENDAVVALTLRKDDNEFEDVNIVKPNDEF
NT seq 282 nt   +upstreamnt  +downstreamnt
atggcaatgtatatccgtgtgaagcgtaataagaccacctactttattcaatgtgaccca
actgagacaattctacaaatgaaggagaaattgtctaacctcatagatcaacctgctaat
gatcagcaattagtcctgctgcctgctggagatgtgttggaagactcgaagtccctagct
gatcagaaggttgaaaatgacgctgtggtggcactgactctgagaaaagatgacaatgaa
ttcgaggatgtgaatatcgtgaaaccaaatgatgaattttag

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