Solanum stenotomum: 125867364 Help Entry 125867364         CDS       T08385                                  Name (RefSeq) vacuolar sorting protein 18-like   KO K20181   vacuolar protein sorting-associated protein 18 Organism sstn  Solanum stenotomum Pathway sstn04148   Efferocytosis Brite KEGG Orthology (KO) [BR:sstn00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     125867364  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sstn04131]     125867364 Membrane trafficking [BR:sstn04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     125867364    Hops complex     125867364 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-RING_Vps41 zf-RING_11 zf_RING_Vps8 zf-rbx1 Nup54_57_C zf-RING_UBOX zf_RING_Vps8_fungal Beta-prop_RSE1_1st zf-C3HC4 zf-RING_2 Motif Other DBs NCBI-GeneID:  125867364 NCBI-ProteinID:  XP_049403791 LinkDB All DBs Position 6:complement(38771613..38841217) Genome browser AA seq 987 aa AA seqDB search MEGRHHVFSVDLLERYATKGRGAITCMATGNDVIVLGTNKGWVIRHDFGVGDSYDIDLSV GRPGEQSIHKVFVDPGGSHCIATVIGSSGADTYYTHAKWTKPRILSKLKGLVVNAVAWNR LHITEASTREIILGTDNGQLYEMAVDVKDKMEKYIKLLFELKELPEAFTGLQMETASVHN GTRFYVMAVTPTRLYSFTGIGSLDAIFASYVDRTVHFMELPGEIPNSELHFFIQQRRAVH FAWLSGAGIYHGDLKFGALHSSPNGDENFVENKALLDYSKFSEGVEGVKPSSLAMSEFHF LLLIGNTVKVVNRISEQVVEELYFDQTPDAVSRGIIGICSDASAGLFYAYDQNSIFQVSV NDEGRDMWKVYLDLKEYAAALASCRDALQRDQVYLVQAEAAFVAKEFLRAASFYAKINYV LSFEEISLKFISIGEQDALRTFLLRKLDNLSKDEKCQITMISTWTTELYLDKINRLLLED DSALDSNNTEYQSLIKEFRAFLSDCKDVLDEATTMKLLESYSRVDELVFFASLKEQYEIV LHHYVQQGEAKKALQVLQKPNVPTELQYKFAPDLIMLDAYETVESWMTTKSLNPRKLIPA MMRYSSEPHAKNETHEVIKYLEYCVHRLQNEDPGIHNLLLSLYAKKEDESALLRFLECKF GKGQPGGPEFFYDPKYALRHCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMIAKHVIEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNEQIEKLKQEMNDATRGADNIRNDISALAQRYTVIDRDEECGVCR RKILNVGGDYRMTTSYMVVGPMAPFYVFPCGHAFHAQCLIAHVTRCTNHAQAEYILDLQK QLTLLGVEPKNVSNGGLCEEPLVSVTPMHKIRSQLDDAVASDCPFCGDLMIREISLPFIL PEEAEESESWEIKPHNHPSQRSLSLAV NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggaaggaagacatcacgttttctctgtagatcttcttgaaagatatgccacaaaaggc cgtggagccattacatgcatggcgactggcaatgatgtcatcgttcttggaaccaacaaa ggctgggtgatcagacatgactttggagtgggtgattcttatgatatagatctctctgtt ggcaggcctggggaacaatcaattcataaggtttttgttgaccctggagggagccactgt attgccactgttattggtagtagtggtgccgatacatattatactcatgctaaatggaca aagcctcgtattttgagcaaactaaaaggtctcgttgtcaatgctgttgcctggaacaga ctacatataacagaagcttcaactagagaaatcattttgggtacggacaatggtcaactt tacgagatggctgtagatgtaaaggataaaatggagaagtacattaagttactatttgaa cttaaagaactacctgaggcattcactggtttgcagatggaaacagcaagtgtgcacaat ggtaccagattttatgtgatggctgttacacctactcgactttactctttcacagggatt ggatcacttgatgcgatttttgcaagctatgtggaccgcacagttcatttcatggagctt cctggtgaaatacctaacagtgaactgcatttctttatccagcaaaggagggctgtacac ttcgcatggctttctggagcaggtatctaccatggtgacctaaaatttggagcactacat agttcgccaaatggggatgaaaactttgtggaaaacaaagctcttctggactactctaaa ttctctgaaggagttgaaggtgtcaaacctagctctctggctatgtccgagtttcatttc ctacttctcattggtaacacggttaaggtggtgaacaggataagtgaacaagtagtagaa gaactttattttgatcagacacctgatgcagtttcaagaggtattattggcatatgtagt gatgcctcagctgggttgttttatgcatatgaccaaaattctattttccaggtgtctgta aatgatgaaggtcgtgatatgtggaaagtgtacttggacttaaaagaatatgctgcagct ttggctagttgtcgtgatgccctgcagagagaccaagtttatctggttcaggctgaagct gcttttgttgccaaggagttcctcagagctgcatcattctatgcaaaaattaactatgta ttatcttttgaagagatctcgttgaagttcattagcataggcgaacaggatgcattgaga acatttctcctgcggaagcttgataatctttcaaaggatgaaaaatgtcaaataacaatg atttcaacatggacaactgaattatatcttgataagatcaatcggctgcttttggaagat gacagtgcattggacagtaataatactgagtaccaatcactcattaaagagtttcgtgct ttcctaagtgactgcaaggatgtattggatgaggcaaccaccatgaagctactagaaagc tacagtagagttgatgagctagtgttctttgctagtctaaaggagcaatatgaaattgta cttcaccactacgttcagcaaggagaagcaaagaaggcgttacaagttcttcagaagcct aatgttccaacagaacttcagtacaagtttgcgccagatctcatcatgcttgatgcatat gaaactgttgagtcatggatgaccactaagagtttgaacccgagaaagctcattcctgca atgatgcgttattcaagtgaaccacatgcaaagaatgaaactcatgaagtaatcaaatac ctggagtattgtgttcatcgtttacagaatgaggatcctggcattcacaatctgttactt tccttatatgccaaaaaggaagatgagagtgctcttctgcgtttcctagaatgcaagttt ggtaaagggcaaccaggtggtcctgaattcttttatgatcccaaatatgcgctacgccat tgcctcaaggaaaagagaatgcgagcttgtgttcatatatacagcatgatgtctatgcat gaagaagcagttgctctagcactacaggttgatccagagcttgcgatggctgaagcagac aaggtagaagatgatgaggacttgaggaagaagctttggctgatgattgctaagcatgtc attgagcaggaaaaaggaaccaaaagggagaatatacggaaggcaattgcttttctcaag gaaactgatggcctattaaagattgaggacatcttacccttcttcccagactttgcttta attgatgacttcaaggaagcaatttgctcatccttagaagattacaatgagcaaattgaa aaactaaagcaggagatgaatgatgcaacacgtggtgctgataacattcgaaatgacatc agcgctcttgctcagcgatatactgtaattgatcgggatgaggaatgtggggtttgccgg cggaaaatattaaatgtgggtggtgattatcgaatgactacaagttatatggttgttgga ccaatggctcctttctatgtctttccatgtgggcatgcatttcatgctcaatgcctgatt gctcacgtgacaaggtgtactaatcatgctcaagctgaatacattctggatctgcagaag caacttactttacttggggttgaacctaagaatgtgtcaaatggtggcttgtgtgaagaa ccgctagttagcgtgacgcccatgcataagatccggtcacagctggatgatgctgtagct agtgattgcccattttgtggcgaccttatgatccgagagatttccttgcctttcattctg ccagaagaagcagaagaatctgaatcgtgggagataaagccacataatcatcctagtcag agaagcctttctttggctgtgtga

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