Solanum stenotomum: 125867403
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Entry
125867403 CDS
T08385
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
sstn
Solanum stenotomum
Pathway
sstn03030
DNA replication
sstn03410
Base excision repair
sstn03420
Nucleotide excision repair
sstn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
125867403
03410 Base excision repair
125867403
03420 Nucleotide excision repair
125867403
03430 Mismatch repair
125867403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sstn03032
]
125867403
03036 Chromosome and associated proteins [BR:
sstn03036
]
125867403
03400 DNA repair and recombination proteins [BR:
sstn03400
]
125867403
DNA replication proteins [BR:
sstn03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
125867403
DNA Replication Termination Factors
ELG1-RFC complex
125867403
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
125867403
DNA repair and recombination proteins [BR:
sstn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
125867403
Check point factors
HRAD17(Rad24)-RFC complex
125867403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Sigma54_activ_2
Mg_chelatase
AAA_16
RsgA_GTPase
AAA_5
AAA_23
DUF815
AAA_22
ABC_tran
RuvB_N
AAA_29
AAA_24
AAA_2
T2SSE
TsaE
Motif
Other DBs
NCBI-GeneID:
125867403
NCBI-ProteinID:
XP_049403851
LinkDB
All DBs
Position
6:complement(55024011..55039062)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDKVTVHQDVAQNLRKLVSEGDCPHLLFYGPSGSGKKTLIMALLRQIFG
PSADKVKVENKIWKVDAGTRTIDVELTTLSSTHHVELNPSDAGFQDRYVVQEIIKEMAKN
RPIDTKGKKGFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCSNSSSKVTEAVRSR
CLNVRINAPMEEEIVSVLEFIAKKEGLQFPQGFAARIVEKSNRNLRRAVLTFESCRVQQY
PFTNNQTIPPMDWEQYVSEIASDIMKEQSPKRLFEVRGKLYELLTNCIPPEIILKRLLFE
LLKKLDSELKHEVSNWAAHYEHRMRLGQKAIFHLEAFVAKFMSIYKSFLISTFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggttgacaagtaccgccctaaaacattagacaaagttactgtacaccaggat
gttgctcaaaatcttcgtaaactggtctcagagggagattgtcctcatctcctcttttac
ggcccttccggttcaggaaagaaaactctcattatggcacttcttagacagatttttggt
ccaagtgctgacaaggttaaggttgagaacaagatttggaaagttgatgctggtactcgg
acaattgatgtggagctcacaacattgtcaagcactcaccatgtggaattaaatccaagt
gatgccggatttcaggacagatacgttgttcaagagataatcaaagaaatggccaagaat
agaccaattgacacgaaagggaaaaaggggtttaaagttttagtgctaaatgaagttgac
aagctctcaagagaagcacaacattctcttcgaagaacaatggagaagtacagtgcatca
tgtcgcctgattctttgctccaacagttcttcaaaggtcactgaagcagttcgctcacga
tgccttaatgtgcgaataaatgcaccaatggaggaagagattgttagtgttttggaattt
attgccaaaaaggaaggacttcaatttccacagggttttgcagcccgcattgtggaaaag
tcaaataggaatctgaggagggcagttttgacatttgagtcttgccgtgttcaacagtat
ccctttacaaacaaccaaactatacctccgatggactgggagcaatatgtttcagaaatt
gcatcagacataatgaaagagcagagccctaaaaggttatttgaggtaagaggaaagtta
tatgagctactaactaattgtattccccctgaaattattttgaagaggctgcttttcgaa
ctattaaagaaattggattcagagttgaagcatgaggtgtccaactgggctgctcattat
gagcataggatgcgccttggacagaaggctatatttcatcttgaagcatttgtggccaaa
ttcatgagcatctacaagagtttccttatttcaacatttggctaa
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