Solanum stenotomum: 125867461
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Entry
125867461 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125867461
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125867461
Enzymes [BR:
sstn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125867461
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
Motif
Other DBs
NCBI-GeneID:
125867461
NCBI-ProteinID:
XP_049403928
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Position
6:complement(1819424..1827678)
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AA seq
683 aa
AA seq
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MMNTIGWKRQLRHLVLWFFAIVFHLFLLVNGSRTDHFRHTPLRNSQKLASTTPVKLLISS
NYVVIDNGIVKVTLTNPTGSIAGVSYNGIDNVLETDFKDTNRGYWDTVWERPGDKDHTFD
MLLGTKFRVIAQDKNKVEVSFTKTWNPSNNGTTHDLPLNIDKRFVMLRGSSGFYSYGIFE
HLKGWPSLILEEARIAIKLKRTLFHYMAISDDIQRMMPTDEDRSDGQILDYREAVRLTNP
SNPKLKGEVDDKYQYSFENKDIKVHGWVCNTPHVGFWVITPSYEDRNGGPTKLDLTSHAG
PTSLAVFFSGHYAGPELGVQIKEGEPWKKVFGPVFFYLNSDSGDNHPTLWEDAKRQMEEE
TAKWPYDFPESIDYPHANARGTIRGQLFVRDRYINKNPVYAKSAYIGLALPGDVGSWQYE
TKGYQFWIQTDETGHFNIIGVRPGTYNLYSWVPGIIGDYKYHYDIIVKQGSDISLGNLIY
DPPRNGPTLWEIGIPDRSAGEFFVPDPLPALTNQLFNNTTQKYRQYGLWDRYTDLYPNKD
LVYKVGVSDYKKDWFFAHVTRRTRSKNYIPTTWQISFELPSVDPKGTYTLRVALASATYS
HLEGRINNPSRTMPHFETPSIGRSNAIARHGIHGLYWLFNFQIQGLHLQKGENTIYLKQI
KGGNPFYGHQYDYIRLEGPPQQN
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatacgatagggtggaagaggcaactacgacatcttgtattatggttttttgca
attgttttccatcttttcttgcttgttaatggttcaagaacggaccactttaggcatact
ccactaagaaatagtcaaaagttggcatcaactactcctgtcaaactgcttatctcaagt
aattatgtagtgatagataatggcattgtcaaagttaccctaactaatcccactggatcc
attgctggggtgagctacaatggtattgataatgtactagagacagacttcaaagataca
aatagaggatattgggatacagtgtgggaacgtcctggagacaaagatcacacttttgat
atgcttttagggacaaaattcagagtcattgcacaagacaaaaataaagttgaagtttct
tttacaaaaacatggaatccttcaaataatggcactacacatgatcttcctctaaacatt
gacaaaaggtttgttatgttgaggggaagttctggattttattcatatgggatatttgaa
cacttgaaaggctggccaagcttaattcttgaagaagccagaattgccattaagctcaaa
aggactctgttccattatatggcaatatcagatgatattcaaaggatgatgccaacagat
gaagatcgatctgatgggcaaattcttgactatagagaagctgttagactaacaaatcca
tcaaatcctaaacttaagggagaggtggatgacaagtaccaatattcatttgagaataag
gatataaaagtacatggatgggtttgcaatactccacatgtaggattttgggttataaca
cctagttatgaagatcgtaatggtggacccaccaagctagatctcacttctcatgctggt
cccacctctttagcggtatttttcagtggacattatgcagggccagagttgggagtccaa
ataaaagaaggagagccatggaaaaaagtttttgggcctgtttttttctaccttaactct
gattctggtgataaccatcctacactttgggaagatgctaaaagacagatggaagaagaa
actgcaaaatggccatatgatttcccagaatctattgattatcctcatgctaatgcacgt
ggtacaattagaggtcaattattcgtacgagacaggtacataaacaaaaatcctgtctat
gcaaaatctgcatatattggattagcacttcctggagatgttgggtcatggcaatatgag
actaaaggttatcaattttggattcaaacagatgagactggacacttcaatattattggt
gttagacctggaacttataacttatattcatgggtccctggaattattggagattacaaa
taccactatgacattattgtcaaacaaggaagtgatataagcttaggtaacctaatttat
gatcctccaagaaatggtccaactttatgggaaattggaattcctgataggagtgctgga
gaattttttgtgcctgatccattgcctgctctaacaaatcaattattcaacaatactaca
caaaaatataggcaatatggtttgtgggatcgatacactgatttatatccaaataaagat
ttggtgtataaagttggtgttagtgattataaaaaagattggttctttgctcatgtaacc
aggagaactagaagcaagaattatataccaacaacatggcaaatttcatttgaactccca
agtgttgatccaaagggaacctatacactacgtgtggcactggcttctgcaacctattcc
catttagaggggaggatcaacaacccctctagaacaatgccccactttgaaactccatca
attgggaggagtaatgcaatagctagacatggaatacatggattatattggctctttaat
tttcaaattcaaggattacatctacaaaagggagaaaatacaatatatttgaagcaaatt
aaaggtggtaatcctttctatggccatcaatatgactacattcgtttggaaggacctcca
caacaaaattaa
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