Solanum stenotomum: 125867625
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Entry
125867625 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125867625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125867625
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125867625
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125867625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
PHD_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
125867625
NCBI-ProteinID:
XP_049404140
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All DBs
Position
6:complement(2850367..2856029)
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AA seq
335 aa
AA seq
DB search
MELDSIECVSSSDGMIDDDEIPLHHPHIIHSQYSSSKTPNNNNNNNNINNSSSNNDGIAA
IHSTTSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARAHNRCPTCRQELGDIRCLAL
EKVAESLELPCKYGSVGCPEIFPYYSKLKHESVCNFRPYSCPYAGSECSVVGDIPYLVSH
LRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQCFCLHFEAFQLGTAPVYM
AFLRFMGDEMEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLVIQRNMALF
FSGGERKELKLRVTGRIWKEQQNPDGGACMPNLCT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggagttggatagcattgaatgtgtatcatcttcagatggtatgatagatgatgatgag
atccctttacatcacccacatattattcattctcaatattcatcttcaaagacacccaac
aacaacaacaacaacaacaatattaacaatagcagcagcaataatgatgggattgctgca
attcattctacaacaagtgttcatgagcttcttgaatgccctgtttgtacaaattctatg
tatcctccaatccatcaatgtcacaatggacacacaatctgttcgacatgtaaagcgagg
gctcacaaccgatgtcccacttgtaggcaggagcttggagatatcagatgtttagctctg
gaaaaggtggctgaatcgcttgagctcccttgcaaatatggctctgttggctgtcctgag
atatttccttattacagtaagctaaaacatgagtcagtttgcaactttagaccatacagc
tgcccgtatgctgggtctgagtgctcagttgttggtgatattccttacttggtttctcat
ttgagggatgatcacaaggtagacatgcactcaggatgcactttcaaccatcggtatgtc
aaatctaatcctcgagaagtagaaaatgcgacgtggatgttgacagttttcaattgtttt
ggtcagtgcttctgtctccattttgaagcctttcagctgggaactgctcctgtatacatg
gcgtttcttcggtttatgggagatgagatggaggctcgaaactatagctacagcctggaa
gttgggggaaatggaagaaaacttacctgggagggtacaccccgaagcataagagacagt
cacaggaaagtaagggatagtcatgatgggctcgtcatacaacgtaacatggcccttttc
ttttctggaggggagagaaaggagcttaagttacgagtaactggaaggatatggaaggaa
cagcagaatcctgacggaggagcatgtatgcccaacctctgtacttaa
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