Solanum stenotomum: 125867760
Help
Entry
125867760 CDS
T08385
Name
(RefSeq) putative late blight resistance protein homolog R1B-16 isoform X1
KO
K13453
disease resistance protein
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125867760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NB-ARC
Rx_N
NB-LRR
AAA_22
AAA_16
AAA_14
AAA
RuvB_N
ATPase
NACHT
nSTAND3
Sld5
AAA_18
NTPase_1
Motif
Other DBs
NCBI-GeneID:
125867760
NCBI-ProteinID:
XP_049404286
LinkDB
All DBs
Position
6:complement(42792118..42809274)
Genome browser
AA seq
1843 aa
AA seq
DB search
MAKECRNAIGTINLVKGQHLDRRTINQLEDATKHLTHVAVFLTNLEERHPANGISGHLRP
LFVEAHDGFSLMCSHPPRSQFTVKLENIAEKFKSSKESRSTRQMIPELLKIIEPENIAKR
IKASKPSRSSSQFTSDMVGFIESLLGSVHRALFFIGVGPPVSMLDKKLRHLQVFFTLISK
RGIEHESTKDLFIHVEDVAYTAAQLCVLRSSCNMDDEFSKLLERISRPFSPKLRQVYLNA
LIGLNSSRSKTTMNAKYMLDFVSTLQDDLRLRCDNRMRWLQRGLSYLCRFLRDIESYPVS
HRQLISLRLNMEDLAIGSANAIYSYDEDMAKTTEIDHELFHLQLKFNYVKVEVDLIRLQN
IQGTIIVPMKDLIDYVWEELMFFRSYFMDAFNQCKEQTTITVILTYIQSAVSQAWSVCDS
LCHDLKQNDLAKEINCLHFQLLLTFKFIKAAIRQMCPSISASSTPDHPMIDLLNFLPMNF
EAIDSYFSVLKASYPSSSHRPNRDAESPNTSFSYGPTITDVDSHYASSPRSPNMDDKPPY
TSSSHIPNMDEILMRFHEYILVNLLRKDETNLTFAVADEVKKFYDGLLLLVTYYVEPPVP
HTECRKQNDLSTGNEAIAVEVESAVCLHYEDNMNNNRRREINQVLQFLTVAFWLVKSEGS
LMDLLKHKSTLGAQVLDLIESAHEELILLRSILMDLLRKKLNKLDDLLMHAEVTAKRLAI
FSGSCYENFMNGSSTEKMRPLLSDFLQEIESVKVEFRNVCFQVLDVSPCTLTDGEGLINF
LLNNQAKVPNDDAVSSDGSLEDASSTEKMGLPSADFPREIESVEIKEARKLCDQVLDATT
PCETSKTDGESFINILLTQQDKVLDYDAGSISYMLNQISVVKDKLLHIGSLLVDVVQYRN
MHLELTDLAERVQDKNYICFFSVKNHIPAWYYTLYLSDVKQLLKFVEAEVKMICLKVPDS
SSYSFPKTNGLGYLNCFLGKLEELLRSKLDLIIDLKHQIESVKEGLLCLKSFIDHFSESY
DEHDDAYGLITSVSVMAYKAEYVIDSCLAYSHPLWYKILWISEVNENLKLVNKVVGETCE
RRKIEVTVHEVAKTTTNVEPSFSANTQRANEEMEGFQDTMDELKEKLLGGSPELDVISIV
GMPGLGKTTLAKKIYNDPEVNSRFDVHAQCVVTQLYSWRELLLTILNDVLEPSDRNEKED
GEIADELRRFLLTKRFLIFIDDVWDYKVWDNLRMCFSDVSKRSRIILTTRLNDVAEYVKC
ESDPHHLRLFRDDESWTLLQREVFQGESCPPKLNDVGFEISKSCRGLPLSVVLVAGVLKQ
KKKTLDSWKEVEQSLSSQRIGSLEESISIIGFSYKNLPHYLKPCFLYFGGFLQGKDIHVS
KMTKLWVAEGFVQANNENGQEDTAQGFLDDLIRRNLVMVMEKRPNAKVKTCRIHDLLHKF
CMEKAKQEDFLLQINSGEGVFPERLEEYRLFVHSYQDEIDLWRPSRSNVRSLLFNAIDPD
NLLWPRDISFIFESFKLVKVLDLESFNVGGTFPTEIQYLIQMKYFAAQTDANSIPSSIAK
LENLETFVVRGLGGEMILPCSLLKMVKLRHIHVNDRVSFGLHENMDELTANSQLANLETF
STPRLFYGKDAEMILRKMPKLRKLSCIFSGTFGYSRKLKGRCVRFPRLDFLSHLESLKLV
SNSYPAKLPHKFNFPSQLRELTLSKFRLPWTQISIIAELPNLVILKLLLRAFEGDHWEVK
DSEFLELKYLKLDNLKVAQWSVSDDAFPKLEHLVLTKCKHLEKIPSHFEDAVCLNRIEVN
WCNWDVANSAQEILTTQHEVIANDSFTVTIQPPDWSKEQPLDS
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggagtgtcgcaatgcaataggtaccataaaccttgtgaagggccagcattta
gatagaaggaccattaatcaattggaggatgctacaaagcacctaacacatgtagctgta
tttctcacaaatctggaggagcgtcaccctgctaatggaatatctggacatcttaggccc
ctatttgtagaagctcatgatggattttctctgatgtgttctcatcctcctcgttctcag
tttaccgttaaattggagaacattgctgagaaattcaaatcttcaaaggagtcaagatca
actaggcaaatgattccagagctgctgaaaataattgaacccgagaatattgctaagcga
atcaaagcttcaaagccatcaagatcatctagccaattcactagtgatatggtggggttt
atcgaatccttgcttggttctgttcatcgtgcattgttctttatcggtgtagggcctcct
gtgtctatgcttgacaagaagctacgacatctacaagtcttctttacactaatttcaaag
cggggcattgagcatgagagtacaaaggatctcttcatccatgttgaggatgtagcttac
actgcagcacaactatgtgtattgcggtcgagctgcaatatggatgacgagttctctaaa
ttgctggaaaggataagtcgtccttttagcccaaaattgaggcaggtttatctcaatgcc
ttgatagggttaaattcatcaagatcaaagactacaatgaatgccaaatatatgcttgat
tttgttagtactctccaagatgatctgagactaagatgtgataatcgaatgcggtggctc
caacgaggactttcttacctttgtcgatttctcagggacatagaatcttatcctgtttca
catcgacaactgatttctcttcgattgaatatggaagatctggctattgggtctgcaaat
gccatctactcctatgatgaggatatggctaagactactgaaatagaccatgagcttttt
catttgcaactgaagtttaattatgttaaagtagaagttgatctgattcggttacaaaac
attcaaggcaccataatagttcctatgaaagatctgattgactatgtttgggaagagctg
atgttctttagaagttatttcatggatgcgttcaaccagtgtaaagagcagactacgata
actgttattttgacctatattcagtctgcagtaagtcaagcatggtcagtctgtgattct
ctttgtcatgacttgaagcaaaatgacttggccaaggaaattaattgcttgcattttcaa
ttgcttcttacgttcaagtttattaaggcggctattagacagatgtgtcccagcatttct
gcatcatcaacaccagaccatcctatgatagatctgctgaactttcttcccatgaacttt
gaggccattgattcctatttcagcgtgctaaaagcctcctatccatcatcctcacatcgt
cccaatagggatgcggaatcccccaatacatcattctcatatggtcccactattacagat
gtggactcccactatgcatcatccccacgtagtcccaatatggatgacaaacccccctat
acatcatcctcacatattcccaatatggatgagatcttgatgaggtttcatgaatatatt
cttgtcaatcttctacggaaggatgaaactaatttgacatttgctgttgcagacgaggtc
aaaaagttttacgatgggttgttgctcctggtcacatattatgttgaacctccagttcct
cacactgaatgcaggaagcaaaatgatctgtcaacgggaaacgaagctattgcagttgag
gtggaatctgctgtgtgtttacattatgaggataatatgaataacaacagacgtagggag
atcaatcaggtacttcagtttttgactgtggctttctggcttgtcaagtctgagggaagc
ttgatggatctactgaagcacaaatccactttgggagctcaagttctagatctgattgag
agtgctcatgaagagcttattctccttagatctattctcatggatcttcttaggaaaaag
cttaacaaattggatgatctgttaatgcatgctgaagtgactgcaaaaaggttagcaata
ttcagtggttcttgttatgaaaatttcatgaacggaagcagcactgagaaaatgaggcct
ttgttatctgattttctgcaagagattgagtctgtcaaggtagagttcagaaatgtatgc
tttcaagttctggatgtatcaccttgcaccctgacagatggagaaggccttattaatttc
ttattaaacaaccaggccaaggtgccgaacgatgatgctgtttcttctgatggaagttta
gaggatgcaagcagtactgagaaaatgggacttccatcagctgattttccccgagagatt
gagtctgttgagataaaggaggccagaaaattatgtgatcaagttttggatgcaacaaca
ccttgtgagacgagtaagacagatggagaaagctttatcaacattttgttaacccaacag
gacaaggtgctggactatgatgctggttcaatctcttatatgcttaaccaaatctcagta
gttaaagacaaactattgcacattggctctttacttgtagatgttgtgcagtaccggaat
atgcatctagaacttacagatcttgctgaacgtgttcaagataaaaactacatttgtttc
ttctctgtcaagaaccatattcctgcttggtattacacactatatctctctgatgtcaag
caattgcttaagtttgttgaggcagaggtaaagatgatttgtctgaaagtaccagattct
tcaagttatagcttccctaagacaaatggattaggatatctcaattgctttttgggcaaa
ttggaggagcttttacgttctaagcttgatttgataatcgacttaaaacatcagattgaa
tcagtcaaggagggcttattgtgcctaaaatcattcattgatcatttctcagaaagctat
gatgagcatgatgatgcttatggtcttataacaagtgtttctgtaatggcatacaaggct
gagtatgtcattgactcatgcttggcctattctcatccactctggtacaaaattctttgg
atttctgaagttaatgagaatcttaagcttgtaaataaagttgttggggagacatgtgaa
agaaggaaaattgaagtgactgtgcatgaagttgcaaaaaccaccactaatgtagaacca
tctttttcagctaatactcaaagagcaaacgaagaaatggagggttttcaggatacaatg
gatgaattaaaggagaaactacttggaggatcacctgagctagatgtcatctcaatcgtt
ggcatgccaggattgggcaagactacactagcaaagaagatttacaatgatccagaagtc
aactctcgcttcgatgtccatgctcaatgtgttgtgactcaattatattcatggagagag
ttgttgctcaccattttgaatgatgtgcttgagccttctgatcgcaatgaaaaagaagat
ggtgaaatagctgatgagctacgccgatttttgttgaccaagagattcttgattttcatt
gatgatgtgtgggactataaagtgtgggacaatctacgtatgtgcttcagtgatgtttca
aaaaggagtagaattattctaacaacccgcttgaatgatgttgccgaatatgtcaaatgt
gaaagtgatccccatcatcttcgtttattcagagatgatgagagttggacattattacag
agagaagtctttcaaggagagagctgtccacctaaacttaatgatgtgggatttgaaata
tcaaaaagttgtagagggttgcctctctcagttgtgttagtagctggtgttctgaaacag
aaaaagaagacactagattcttggaaagaagtagaacaaagtctaagttcccagaggatt
ggcagcttggaagagagcatatctataattggattcagttacaagaatttaccacactat
cttaagccttgttttctctattttggaggatttttgcagggaaaggatattcatgtctca
aaaatgaccaagttgtgggtagctgaagggtttgtacaagcaaacaacgaaaacggacaa
gaagatactgcacaaggtttcttggatgatcttattcgtaggaatctagtgatggtcatg
gagaagagacctaatgccaaggtgaaaacgtgccgcattcatgatttgctgcataaattc
tgcatggaaaaggccaaacaagaggatttccttctccaaatcaatagtggagaaggtgta
tttccagaacgattggaggaataccgattgttcgttcattcttaccaagatgaaattgat
ctgtggcgtccatctcgctctaatgtccgctctttactattcaatgcaattgatccagat
aacttgttatggccgcgtgatatctccttcatttttgagagcttcaaacttgttaaagtg
ttggatttggaatcattcaatgttggtggtacttttcccactgaaatacaatatctaatt
cagatgaagtactttgcggcgcaaactgatgcaaattcaatcccttcatctatagctaag
cttgaaaatcttgagacttttgttgtaagaggattgggaggagagatgatattaccgtgt
tcacttctgaagatggtgaaattgaggcatatacatgtaaatgatcgggtttcttttggt
ttgcatgagaacatggatgaattaactgctaactcacaattagctaatttggaaaccttt
tctactccacgtctcttttatggtaaagacgcagagatgattttgaggaagatgccaaaa
ttgagaaagttgagttgcatattttcagggacatttggttattcaaggaaattgaagggc
aggtgtgttcgttttcccagattagattttctaagtcaccttgagtccctcaagctggtt
tcgaacagctatccagccaaacttcctcacaagttcaatttcccctcgcaactaagggaa
ttgactttatcaaagtttcgtctaccttggacccaaatttcgatcattgcagaactgccc
aacttggtgattcttaagttattgctcagagcctttgaaggggatcactgggaagtgaaa
gattcagagttccttgaactcaaatacttaaaactggacaacctcaaagttgcacaatgg
tctgtctctgatgatgcttttcctaagcttgaacatttggttttaacgaaatgtaagcat
cttgagaaaattccttctcattttgaagatgctgtatgtctaaatagaattgaggtaaac
tggtgcaactgggatgttgccaattcagcccaagaaattctaactacacaacatgaagtt
atagcaaatgattcattcacagttactatacagcctccagattggtctaaagaacagccc
cttgactcttag
DBGET
integrated database retrieval system
