Solanum stenotomum: 125867825
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Entry
125867825 CDS
T08385
Name
(RefSeq) protein argonaute 4A-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125867825
03036 Chromosome and associated proteins [BR:
sstn03036
]
125867825
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
125867825
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
125867825
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
125867825
microRNA pathway
RISC loading complex
125867825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF7780
Motif
Other DBs
NCBI-GeneID:
125867825
NCBI-ProteinID:
XP_049404367
LinkDB
All DBs
Position
1:complement(13402960..13409383)
Genome browser
AA seq
885 aa
AA seq
DB search
MLLQMASSKDEGTATKSDRLPMARQGTGSKGQKIRLLTNHFRVGMNNSDGHFFHYSVAIN
YEDGNPVEVKGIGRKILDKVHQTYSMELAGKDFAYDGEKSLFTIGALPGNKFEFDVVLED
VSSSRTTRGSPGGSPSDVDRKRSKNQPWSKAYKVVIKYAAKIPMQAIANALRGQDSEQYQ
EAVRVLDIILRQHAAKRGCLIVRQSFFHNEPRNFVDLGGGVSGCRGFHASFRATQGGLSL
NMDVSTTMIVKPGAVIDFLLANQNAKDPYQIDWSKAKRMLKSLRIKASPSNREYKITGLS
DKPCREQTFTLKQKNGDGGMQEVETSVYDYFTHHRRIPLQYSGDFPCINVGKPKHPTFIP
LELCSLVSLQRYTKALSNLQRASLVEKSRQKPQERMRTLTDALKTSNYKADPLLGSAGIS
INDQFTQVDGRILPTPKLRVGDDQDLFPRNGRWNFNQKRLVEPVKLERWAAVNFSARCDV
RKLCMDLQRCGKMKGIFINPPFQHIFEENQQYRRNPAPVRVEKMLEELKSKLPAPPQFLL
CILPERKNSDLYGPWKKRNLADLGIVTQCIAPTKINDQYLTNVLLKINAKLGGMNSFLTT
ELSPTLPQISKVATIIIGMDVSHGSPGRADAPSIAAVVSSRQWPFISRYRAAVCTQSPKL
EMIDSLFKKVSDTEDEGLFRELLRDFYVSSKNVKPEHIIIFRDGVSESQFNQVINIELNQ
IIEACNHLEEDWSPKFTVIVAQKNHHTRFFQTNSPDNVPPGTVIDNAVCHPKTNDFYMCA
HAGPIGTTRPTHYHILHDEIGFSADDMQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQ
VAQFIKFDEISEATSSHGGVSTAGTVLVPPLPRLHKNVRSSMFFC
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgttattacaaatggcctcttcaaaagatgaaggtacagcaacaaaatcagaccgtctt
cctatggctcgacaaggaactgggtcaaagggacagaagattcgcctactcaccaaccat
ttcagagtagggatgaacaactctgatgggcacttcttccactatagtgttgctataaat
tatgaagatggaaaccccgtagaggtgaaaggaattggacgaaaaatccttgacaaggtc
caccaaacttattcaatggagctagctggcaaagactttgcttatgatggggagaagagc
ttgttcactattggtgcactgcctgggaacaagtttgagtttgatgttgtcctggaggat
gtctcttcatctagaactactcgaggcagccctggagggagcccaagtgatgttgatagg
aaaagatcaaagaaccagccatggtcaaaggcatacaaagtggttattaagtatgctgca
aaaataccaatgcaagccattgcaaatgcactccggggacaagattctgaacagtatcaa
gaggcagtgagagtgcttgacataattctgaggcagcatgctgccaaacggggctgcctt
attgtgcgccagtctttttttcacaatgagcctcgaaactttgttgatcttggtggagga
gtttcaggatgccgaggtttccatgcaagcttccgggccacacagggaggcctttcattg
aacatggatgtgtcaaccacaatgattgtgaagccaggggcagtgatagatttccttctt
gccaatcaaaatgcaaaagatccttaccagattgattggtccaaggcaaagaggatgctg
aagagtctgaggatcaaggccagcccttcaaatagggaatacaaaatcaccggcctcagt
gataagccttgcagagagcagactttcacgttaaagcagaaaaatggggatgggggaatg
caagaggttgagacgtctgtttatgattatttcactcatcatcgccgtattcctttacaa
tattctggagattttccttgcattaacgttgggaaaccaaagcacccaacatttattcct
cttgagttatgctctctggtgtctctgcaacgctacaccaaggccctgtccaatctacaa
agagcttcccttgtagaaaaatcccgacaaaagccccaagaaaggatgagaacattgacc
gatgctctaaagaccagcaactataaggctgaccctcttcttgggtctgctggaatttca
atcaatgatcagtttactcaagttgatggtcgtatcttgccaactccaaagttgagggtg
ggggacgatcaagacttgtttcctagaaatggaagatggaattttaaccagaagcgattg
gttgaaccggtcaaacttgagcgttgggcagctgtgaacttttctgcccgttgtgatgtt
cgtaagctttgtatggatctacaaaggtgtgggaaaatgaaaggaattttcatcaatcca
ccatttcagcatatctttgaggagaatcagcagtacaggcgaaatcctgctcctgtgaga
gttgagaaaatgttagaagaattgaaatcaaaacttccagctccacctcagttccttcta
tgcattcttccagagagaaagaactctgacctttatggcccctggaagaaaaggaattta
gctgatcttggaattgttacacagtgcattgctcctacaaagatcaatgatcagtacctt
accaatgtgctcctgaaaatcaatgcaaagctgggcggcatgaattcctttttgactaca
gagctttcccctacactacctcagatttccaaagtcgccactatcattattgggatggat
gtctctcatggctcacctggacgagcagatgctccatccattgcagcggtggtcagctct
agacaatggccctttatttcacgctatcgagcagctgtttgtacacagtcaccaaagctg
gaaatgatagattctctgttcaagaaagtatcagataccgaagatgagggccttttcagg
gagctgctcagggacttctatgttagttcaaaaaatgtgaaacctgagcatatcatcatc
ttcagagatggagtaagtgagtcccagttcaaccaagtcattaacattgagctcaatcag
attatcgaggcctgtaatcatctggaagaagattggtctccaaagttcactgtcattgtt
gcacaaaagaaccaccacacaagatttttccagaccaactcaccggataatgttcctcct
gggactgtgattgacaatgcagtttgccatccaaagaccaatgacttctacatgtgtgct
catgctggacctattggaacaacaagacctacacactaccatattctgcatgatgaaatt
ggattctcagcagatgacatgcaagagctggtccattcattgtcttatgtgtatcagaga
agtaccacagccatctctgttgttgcacctatatgttatgcccacttggcagcagcacag
gtggcacagtttatcaagtttgatgaaatttcagaggccacctcgagccatggtggagtt
tcaacagccggtactgttctagtccctccattgcctcggcttcacaagaatgttcgcagt
tcaatgttcttctgctaa
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