Solanum stenotomum: 125867907
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Entry
125867907 CDS
T08385
Name
(RefSeq) protein transport protein Sec24-like CEF
KO
K14007
protein transport protein SEC24
Organism
sstn
Solanum stenotomum
Pathway
sstn04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125867907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125867907
Membrane trafficking [BR:
sstn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
125867907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
V-ATPase_G_2
Sen15
Motif
Other DBs
NCBI-GeneID:
125867907
NCBI-ProteinID:
XP_049404452
LinkDB
All DBs
Position
6:58523554..58540948
Genome browser
AA seq
1080 aa
AA seq
DB search
MEAPGGPRPGNVPPNYNPDALAHGMQHLEINRPNHPPTNPTGGPRPSATPFGQQPPSFAG
GLPANRPGPPPPGAFQRGPPQTTLPPNVVSRPTVSPSAGQAPPSFASRPPPAGAVLHSVG
SPAIRPPPGALPSASGPRAGPPGPFAVSTGLLVPPSGVSSSASNGPPAFGPGTMQGGPHF
PPPSRPPAGALLSAMLSSGTPSLPPRMHPSFGSPPSSSTSVTAQPPPPFLGSTQNVPPSS
SSSTFAPPVQVMPPPMVAPYGMQTWQTQPHQVAPLSAVPGSMQPPMMFGMTSLHSNQAEA
AVTPSMGHAGSALTGQSNFDSSQIPRPIPNSAAILHETRQGNKANPPPPATSDYIVWDTG
NCSPRFMRCTVNQIPCTSDLLTTSAMQLSLLVQPLALPHPSEQPIQVVDFGESGPVRCSR
CKGYINPFMKFIDQGRRFICNLCGYTDETPQDYHCNLGPDGRRRDADERPELCRGTVEFV
ATKEYMVREPMPAVYFFLIDVSMNAIQTGATAAACSAISQVISDLPEGPRTLIGIATFDS
TIHFYNLKRALQQPLMLIVPDVQDVYTPLRSDVIVQLSECREHLELLLENIPTMFGHNRT
ADSAFGAAVKAAFLAMKNTGGKLLVFQSVLPSTGVGALSAREAEGRSAVSAAETEAHKLL
QPADKTLKTMAIEFAEYQVCVDVFLTTQSYVDIASISVIPKTTGGQLYYYFPFSAISDAA
KLYNDLRWNITRPQGLEAVMRVRCSQGLQVNEYSGNYCKRIPSDVDLPAIDCDKTIMVTL
KHDDKLQDGSECSFQCALLYTTINGQRRIRISTFSLPCTTMLSDLFRSADLDTQFACILK
QAASEVPTAPLPQIREHVTNHCINILYSYRKFCATVSSSGQLILAEALKLLPLYTLALIK
STGLQTDEPIDTRSFWINYVSPLSVSLAIPWVHPRLIAIHELNTKENEESLIPHPIPLSS
EHINDNGIYLLENGEDCLIYVGNSADPSVMHQLLGISSVEQVPAQFVLQQHDNPLSKKLN
DIINEIRRQRCNYLRLRLCKKGDSSGMLFFSNMVEDKASIGLSYVEFLVHIHRHVQSKMA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggaagctccagggggacctagaccagggaatgtaccacccaattacaatcctgatgca
cttgctcatggaatgcaacatttggaaattaatagacccaaccacccacctacaaacccc
actggtggtcctaggcctagtgcaacaccttttgggcagcagccaccctcttttgctggt
gggctgcctgcgaatcgtccaggacctcctccacctggtgcattccaaaggggtcctccg
caaactacattgcctccgaatgtagtttctagaccaaccgtctctccttctgcgggtcaa
gctccaccgtcctttgcatctaggccacctcctgctggtgcagtgcttcattctgttggt
agtcctgccattcgaccgccacctggtgctttgccttccgcctcaggtcctcgtgctggc
ccgccaggaccttttgctgtttcaacaggtcttcttgtgccgccttcaggtgtttctagt
tcagctagtaatgggccacctgcatttggtccagggacaatgcagggtggaccacatttt
cctcctccaagcaggccaccagctggagctcttctgtcagcaatgttatcatctggaact
ccttctctgcctccaaggatgcatccatcctttgggagtccaccttcaagctcaacatca
gttactgcacaaccgccgcctccatttctgggatcaactcagaatgtgccaccttcttca
agttcctccacatttgcaccacccgtccaagtgatgcctcctcctatggttgctccttat
ggaatgcaaacatggcaaacacagccccatcaggttgctccactttctgctgtccctggt
tcaatgcaaccacctatgatgtttgggatgacgtctctgcattcaaatcaagcagaagct
gcagtaactccttctatgggtcatgctggatctgcattaactggacaatcaaactttgat
tccagtcaaattccgcgcccaattccaaattctgcagcaatcttgcatgaaactcgtcaa
ggcaataaagccaatccccctccgcctgccaccagtgactacattgtttgggatactgga
aattgcagtccacggttcatgaggtgtactgtcaatcagattccatgcaccagtgacctt
ttgacgacctctgcaatgcagttgtctctgttggtccaacccttggctcttcctcatcca
tctgaacagcccattcaagttgttgattttggggaaagtggtcctgttcgttgctctcgc
tgcaaaggctacataaatccttttatgaagttcattgatcagggaaggcgtttcatttgt
aacttatgtggatataccgatgaaactcctcaggattatcactgcaacttaggtccagac
ggcaggcgtagagatgctgatgaaaggccagaactatgccgaggaactgttgaatttgta
gctactaaggaatatatggtgcgtgagccaatgcctgctgtatatttcttccttattgat
gtctccatgaatgccatacaaactggtgcaactgcagctgcttgcagtgcgataagccaa
gtcatttctgatcttcctgaaggtcctcgaacattgatcggaattgctacatttgactcg
actatccatttttacaatctaaaacgtgcactgcagcagccattgatgcttattgtccct
gatgtccaagatgtttacactccccttcggagtgatgttattgtgcagctctcagagtgt
cgtgaacatctagagcttctcctagaaaacatcccaacaatgttcgggcataacaggact
gctgattcggcttttggtgctgcagtcaaggctgctttcttggcaatgaaaaacaccgga
gggaaacttcttgtatttcaatcagtcttgccttctactggtgttggagccctttctgct
agagaagctgaaggaagaagcgcagtatcagctgctgaaacggaggctcacaaattactc
caaccagcagacaaaaccctgaagacaatggctatcgagtttgctgagtatcaggtttgt
gttgatgtgtttcttacaacacaatcatatgtagacatagcttccatttctgtcattcct
aaaactactggaggacagctgtactactatttccctttctctgctatttctgatgctgcc
aagctttacaatgatctgcgatggaacattactaggccccaagggcttgaggcagtaatg
cgtgtaagatgcagtcagggtcttcaagttaacgagtactccggaaattattgtaaacga
attccatcagatgttgacttgcctgcgattgactgtgacaaaacaataatggtaacattg
aagcatgacgacaaattgcaggatggttcagaatgctcttttcagtgtgctcttctttac
accaccatcaatggccaaagaagaatcaggatttcaactttctctctgccttgcaccact
atgctcagtgatttgtttcgatcagctgacttggatacccaatttgcgtgcatcttaaag
caagcggccagtgaagttccaacagcacctctcccacaaatccgagagcatgtgacaaac
cattgcattaacattctatactcttatcgtaaattctgtgctactgtctcatcctctgga
cagcttattcttgctgaggcacttaagcttcttcctctttacacactggctctgattaaa
agcacgggattgcaaactgatgaaccgattgatactaggtccttctggattaattatgtt
tccccactgtctgtttcattggctatcccttgggtgcaccctagattgatagccattcat
gaactcaatacaaaggagaacgaggaatctcttattcctcatcctattccactttccagt
gaacatatcaatgacaacggtatctatcttctagagaatggcgaggactgtttaatttat
gttggtaactctgcagatcctagtgttatgcatcaactgcttggcatttcgtctgttgaa
caagttcctgcacagtttgttctgcagcagcatgacaatccactctctaagaagctcaac
gatatcattaatgaaattagacgccaaagatgtaactatctccgcttaagactatgcaaa
aagggagattcatcaggtatgttgtttttctccaacatggtagaagacaaggcatccatt
ggactttcgtatgtcgagtttctggtacatatccatcgacatgttcaaagcaaaatggct
tga
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