Solanum stenotomum: 125867964
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Entry
125867964 CDS
T08385
Name
(RefSeq) nuclear transcription factor Y subunit B-1-like
KO
K08065
nuclear transcription Y subunit beta
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125867964
Transcription factors [BR:
sstn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
125867964
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
TFIID-18kDa
Histone
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
125867964
NCBI-ProteinID:
XP_049404511
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All DBs
Position
6:44103937..44104572
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AA seq
192 aa
AA seq
DB search
MSPELPAHLNQEVVEIIIQEQDRFIPNVARIMDSTHPSHAKISDDAKRTMYECISEFICF
VTYEANAHCQREQRNTITDEDVHWVINKFGFDDYIEPFPLYFPRCREDDGGEYGSLIGES
LLKRPMVDTTSSCNITPYHLPPNFPMAGQHFVYPPPMGNGDLQGDASNGSTSQCVMTSMN
SDVESPMEEDKE
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgaactgcctgctcatctcaaccaggaagttgttgaaatcatcattcaggag
caagaccgattcataccaaacgtggccagaatcatggatagcacccatccttcccatgcc
aagatatccgatgacgccaaacggaccatgtacgaatgtatctctgagttcatatgcttt
gtaacatatgaagccaacgctcattgccagcgtgagcagcggaacaccatcactgatgaa
gacgtgcattgggtcattaacaagtttggttttgatgactacattgaaccctttcctttg
tactttcctcgttgtcgtgaggatgatggtggcgaatatggatcccttataggggagtct
ttgttgaagcgtccaatggttgatacaacttcaagctgcaacatcacgccttatcacctg
cctcctaattttcctatggctggtcagcactttgtgtatccaccaccaatgggaaatggt
gatttgcagggggatgcatctaatggaagcacttctcagtgtgtaatgacttcaatgaat
agtgacgttgaatctcctatggaggaggataaggagtga
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