Solanum stenotomum: 125868102
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Entry
125868102 CDS
T08385
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sstn03036
]
125868102
Chromosome and associated proteins [BR:
sstn03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125868102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
HEAT_2
Motif
Other DBs
NCBI-GeneID:
125868102
NCBI-ProteinID:
XP_049404663
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Position
6:31769760..31788506
Genome browser
AA seq
1102 aa
AA seq
DB search
MEEEPVVSETANRRTKRTRAQTRVNEEQLHSSVNEEEREESSEDFEDSRARAKRSKALGG
TSSAAAAARNAHQSLIDVVKGDRRQIPLVVKHWVEHYEKDPKAAMAGLLSMMFEACGAKY
HIEEDFLDQTDVDDVVVALVNMAKRGEVEDYQTSKKKDFKNFKDNLVYFWDTLVAECENG
PLFDRVLFDKCMDYVIALSCTPPRVYRQVASLMGLQLVTSFIHIAKVLGSQRETTQRQLN
AEQKKKVDGPRVESLNKRLSMTHEKITIIEEMMRKIFTGLFMHRYRDVEPDIRMACIQSL
GVWILSYPSLFLQDLYLKYLGWTLNDKSDGVRKASVLALQNLYEVDDNVPSLGLFTERFY
KRMIELADDVDISVAVCAIGLVKQLIRHQRVPEEELSSLYDLLIDDPPEIRRAIGALVYD
NLIAQRLNSSQSSSGDNADSSEVHLNRLLRILGEFSKDEMLSMYVIDDIWEYMDAMKDWK
RILSMLLEEELSAELSDVDATNLIRLLFASIRKAVGEKIVPASDNKKQYYTKAQKDVFES
SKRDITIAMMRNYPQLLRKFMSDKAKIPYLLEIIVHMNLELYSLKRQDQNFKSAVLLMKE
AFFKHGEKEALRSCVKALNFCATESRGELQDFALNKLKGIEDELIIKLKSAIKEVADGDD
EYSMLVNLKRLYELQLSRQISIESLYNDLAETLKNLRSIDDEVIGFLLLNMHLHVCWCLH
SIINSGTVLEQSISSVISKRSALFELLESFLTTNSPEGLRASQLACRVCVIFSEQWCLFR
KATFASTEIEALGYSPDEAILQKFWKLCERQLHIPDEAEEEDSNREYIEETNRDAVIIAV
GKLVAVDAVPKEYLAPEILSHLSMHGTSVSEVIKHLLTVLRNNGADVACLFLEALKRAHE
RYLVALFSDDDESARKTFHECEDLASGFAKTFGNAARNKHRSDLLNIVTGGIQYAFTDAP
KHLSFLDGAVLHFISKLPPPDIMNFLKDVEKRTENVNTDEDPSGWRPYHIFVDTVHEKYA
KGEVLQDDKEGTVGRRRGRPTKKQNIQGKKLFDEHNSSEDEESISGSDQEADEEKQDDEE
VPLIHSFKSSAKLRSLKISRES
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaaccagtggtatcggaaacagcgaatcgtcgtacgaaacgaacgagagct
caaactagggttaacgaagagcaattacacagcagtgtgaatgaggaagagagagaagaa
tcgtccgaggactttgaagactctcgtgctagagctaagcggagtaaggctttaggaggc
acttcatctgctgctgctgctgctagaaatgctcatcagagtttaattgatgttgttaaa
ggtgataggagacaaattcctctagtggtcaagcattgggtggaacactatgagaaggat
ccgaaagctgcaatggctggactattgagcatgatgtttgaggcatgtggagcaaaatat
catattgaagaagatttcttggaccaaaccgatgttgatgatgttgtagttgctcttgta
aacatggctaaaaggggtgaagttgaggattatcaaacttcaaagaagaaggacttcaag
aacttcaaagataacctcgtctacttctgggatacactggttgctgaatgtgaaaatgga
ccactttttgatagggtcttgtttgacaagtgcatggattatgtgattgcgctatcatgc
actcctcctagagtatatcgtcaggttgcttcattaatggggcttcaacttgttacatcc
tttatacacattgccaaagtacttggttcacagcgggaaaccacacagagacagctaaat
gctgaacagaagaagaaagtggatgggcctcgagttgaatcactaaataaaagattatcc
atgacccatgaaaagataacaataatagaggagatgatgcggaagatatttactgggcta
tttatgcaccgttatcgagatgtcgaacctgatatcagaatggcatgcatacagtcattg
ggtgtctggatcctgtcatacccctccctgtttttgcaggatttgtatttgaaatatctc
ggatggacattgaatgataaaagtgatggtgtaaggaaggcatcagttcttgcactgcag
aatctttatgaggtggatgataatgtaccatctcttggccttttcacggagagattttat
aaaaggatgatcgagcttgctgatgatgttgatatttctgtggcagtatgtgctatagga
ctcgtgaaacaactgataagacatcaacgtgttcccgaggaggaattaagttctttatat
gatttgctaattgatgatccacctgaaatcaggcgtgccattggagctctagtgtatgat
aatctgattgcccagcgattgaacagttcacaatctagttcaggggataatgctgattct
tctgaggttcatcttaatagactgttgcgcatattgggagagttttcaaaagacgaaatg
ctgagtatgtatgtcatcgatgatatttgggagtatatggacgccatgaaagattggaaa
cgtatcctgtctatgctcttggaagaagagctatcagctgaactaagtgatgtagatgca
acaaacctaattcggctgctttttgcgtccattaggaaggcagttggagagaagattgtt
cctgccagtgataataaaaaacaatattatactaaggcacaaaaggacgtgtttgaaagt
tctaagcgtgatataaccattgctatgatgaggaattatccacagcttcttcgcaaattt
atgtctgacaaagcaaaaattccctatctacttgaaatcattgttcatatgaaccttgag
ctctattctcttaaaagacaagatcagaattttaaatctgctgtacttctgatgaaagaa
gcatttttcaagcatggtgagaaggaagctctgagatcttgtgtaaaagctctgaacttc
tgtgctactgagagtcgtggggagttacaggactttgcccttaacaaattgaaggggatt
gaagatgagctcattatcaaacttaaatctgcaataaaagaagttgctgatggtgatgat
gaatattcaatgcttgttaacttgaaaaggttgtatgaacttcaattgtcaaggcaaatt
tccattgaaagcttgtataacgatcttgcagagactcttaagaacttaagaagtattgat
gacgaggtaattggatttctgcttcttaacatgcatctgcatgtttgctggtgcctacac
tctatcatcaactctggcacagtcctggaacaatctatatcttccgtaatctcaaaacgc
agtgccttgtttgaactacttgagtccttcctgactactaattctccggaaggtcttcgt
gcaagtcaacttgcatgtagggtttgtgttattttttcagaacagtggtgtctgttcagg
aaagcaacctttgcatccacggaaatagaagctttggggtactctccagatgaagccatt
cttcaaaagttctggaagctttgtgaacgccaactacatattccagatgaggctgaagaa
gaagattctaatagggaatacattgaggagacaaatcgagatgctgtgatcattgctgtt
gggaagttggttgctgttgatgcagttcctaaggaatatcttgctccagagatactatct
catctttcaatgcatgggacaagtgtatctgaggttattaagcatttgctaactgtgtta
aggaataacggtgcagatgttgcatgtttgttcctagaggcactaaaaagggcccatgaa
cggtacttagtagcacttttctctgatgacgacgaatcagcgagaaagacttttcatgaa
tgtgaagatctcgccagtgggtttgctaagacatttggaaatgctgctagaaacaagcac
cggtcagatcttctgaatattgtcacaggaggcattcaatatgcctttactgatgctcca
aagcatttatctttcttggatggtgctgtgctgcatttcatatctaaacttcctcctcca
gatattatgaacttcttgaaagatgtcgagaaaagaactgaaaatgttaacacggatgaa
gatccaagtggttggcgaccctatcatatatttgtagatacggtccatgagaagtatgct
aagggtgaagttttacaagatgataaggaaggtacagtcgggagacgtcgaggtcgtccg
accaagaagcagaacatacaaggaaagaagctttttgacgagcacaattctagtgaagat
gaggaatcaatcagtggatctgaccaggaggcagatgaagaaaaacaagatgacgaagag
gtccctctaatacattcttttaagtcatcagccaagctaaggtctctgaagatatcaaga
gagagctga
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