Solanum stenotomum: 125868135
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Entry
125868135 CDS
T08385
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125868135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125868135
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125868135
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125868135
NCBI-ProteinID:
XP_049404696
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Position
6:complement(3104424..3174932)
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AA seq
723 aa
AA seq
DB search
MMNPNQEKYVRFEDWKSEQSSFSIDNENSQDNRPFYVRKPSLSSLMSSVKRRFERGSKRI
SSWRKSIRVYPLTDKPTKDQYVEPKKKVHDPQGRFLQQWNKVFVLVCIIAVSLDPLFFYI
PVIDNSKKCLDLDRALKITACVLRSITDLFYIFHIILQFRTGYIAPPSRIFGRGELVEDS
YDIAKRYLLSYFIVDVVAVLPLPQIVILVVTPNANGSIALATKEMLKIVIFAQYFPRIFR
IYPLYKEVTRTSGLFTESAWGGAVFNLSLYMLASNVIGAFWYLFSVERQDTCWRNACLKI
TGCSLHHLYCDKSSIENASLLNSSCPLMKQEDIRDPNVFDFGIALDALQFRIVEKRKFCT
KLFYCFWWGLRNLSSLGQNLKTSTFVGEILFAVFISIIGLILFSLLIGNMQKYLQSITVR
VEEMRVRRRDAEQWMSHRMLPDNLKERIRRHEQYKWQETRGVEEGLLLQDLPRDLRRDLK
RHLCWSFLKKVPIFEKMDDQLLDALCDRLKPALFTDKSFIIREGDPVEEMLFLMRGTLLT
MTTNGGRTGFFNSAHLKAGGFCGDELLTWALDPHPSSSSLPISTRTVQAVTDIEAFAVTA
DDLKFVAAQFRRLNSKQIRHTFKFCSQQWRTWGACFIQVAWRRYCRNKLEKSLRKEEDRL
QAALAKESTNTTSLGATIYASRFAANALRALRRKHATGAKLSPTLPLLLHKPSEPDFSEE
NDS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccaaccaggaaaaatatgtaaggtttgaggattggaagtcagaacaatca
tccttcagcattgacaatgaaaattctcaggataataggccattttatgtcagaaaacca
tcattgagctcgttgatgagcagcgttaaaagaaggttcgagaggggttctaaaagaatt
agtagctggagaaaatcaattcgcgtgtatcctctaactgataagccaacaaaagatcaa
tatgtagaaccaaagaagaaagttcatgatcctcaggggagatttcttcagcaatggaac
aaagtatttgtattggtttgtataattgctgtgtcactggatccgttgttcttctacatt
cctgtcattgataacagcaaaaagtgccttgatttggacagggcgttaaagatcaccgct
tgtgttcttcgttctatcactgatcttttctatatctttcacattatcttgcaatttcgt
actggctacattgctcctccttctcgaatttttggaagaggtgagttggttgaagattcc
tatgatatagccaagcgatatttgttatcatatttcatcgttgacgttgtagcagtcctt
ccactcccacagattgtgatattggttgtcactcccaatgcgaatggctctattgctctg
gcgacgaaagaaatgttaaagattgtcatttttgctcaatattttccaagaatttttaga
atttatccattgtacaaagaagtaacaaggacttcaggcttatttactgaaagtgcatgg
ggtggagctgttttcaacctttccctctacatgctagccagtaatgtaattggagcattt
tggtatttgttctcagtagaacgccaagatacatgctggcgcaatgcgtgtctcaagatc
actggctgttcattacaccacttatattgtgacaaaagttcgattgaaaatgcttcctta
ctgaattcttcttgccctctcatgaaacaagaagatatacgtgatccaaatgtctttgat
tttggaatcgctcttgatgctcttcagtttcggattgtggagaaaaggaaattctgtacc
aaactcttctattgcttttggtgggggctgagaaacttaagttctcttggccaaaacctg
aagacaagcacttttgtcggagagattctcttcgcggtcttcatctcaatcattgggctt
atcttgttttccttgcttattggcaatatgcagaaatatttgcaatctatcacggttaga
gtagaagagatgagagtgagaaggcgggatgcagaacagtggatgtctcatcgcatgctt
cctgacaatctgaaagagcgaattagacgacatgaacagtacaagtggcaagaaaccagg
ggagttgaggaaggtttactgcttcaagatcttcctagagacttgaggagagatttaaag
cgccatctctgttggtcttttctcaaaaaagttcccatatttgagaaaatggatgaccaa
ttactggacgcgttgtgtgacagactgaagccagcactcttcacagataagagcttcata
atccgagaaggtgatccagtagaagaaatgctctttctaatgagaggtacactgttaact
atgaccacaaatggtggaaggactggttttttcaactctgctcatctcaaggctggtggc
ttctgtggagatgagcttttaacatgggctttagaccctcatccttcctccagtagtctt
ccaatttcgactagaacagtacaggctgtaactgatatagaagcttttgccgtcactgct
gatgacctcaagtttgtcgccgcacagtttagacgtctaaatagcaagcagattcggcat
actttcaagttctgttcgcagcagtggaggacatggggtgcatgctttatacaagtagca
tggcgtcgatactgcaggaataagctcgagaaatctttacgaaaggaagaagatagactg
caggctgcattggcaaaagagagcacaaatacaacaagtcttggagctaccatttatgca
tcaaggtttgctgctaatgctctgcgcgccttgcgacgtaagcacgcaactggtgcaaaa
ttatctcccacattacctctgctgcttcataaaccatccgaaccagatttcagtgaggaa
aatgattcatga
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