Solanum stenotomum: 125868185
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Entry
125868185 CDS
T08385
Name
(RefSeq) agamous-like MADS-box protein AGL27
KO
K27808
MADS-box protein FLC/MAF
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125868185
Transcription factors [BR:
sstn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
125868185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
DUF7603
bZIP_1
DUF2452
Motif
Other DBs
NCBI-GeneID:
125868185
NCBI-ProteinID:
XP_049404768
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Position
6:37371362..37405617
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AA seq
204 aa
AA seq
DB search
MGRKKVEIKRIEDKSSRQATFSKRRNGLMKKAKQLSILCDVDVAVLVFSSRGRLFEFSST
NSLTGVIHRYNTHMKAEDKVSAEVDDTEESKYASFMRMEELLQTVEKQLKEPDVDDLSIT
DLVHLENQVETALTQTRFRKTHLLIESIKNLHDKEKQLIEENKVLEDEIGTIKNREENEM
AMNLNNIAPTHMDCGQQRVTLNFL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggaagaaagtggaaataaagcgaattgaagataagagcagtaggcaagcaact
ttctccaaacgaagaaatggactcatgaagaaagccaaacagctctctattctctgcgat
gttgatgtcgccgtcctcgtcttctccagccgtggacgcctctttgaattctccagtacc
aacagtctgacaggagttattcaccgatataacacccacatgaaagcagaagataaggtc
tctgcagaagtcgatgacacagaggaatcaaaatatgcaagtttcatgagaatggaagaa
ctgctacagacggtagaaaagcaactcaaggagcctgatgttgatgatctcagcattact
gatcttgtccatttggaaaaccaagtcgagactgctctgacacaaaccagatttagaaag
acacacttgttgattgaatcaattaagaatcttcatgacaaggaaaagcagctgatagaa
gaaaacaaagttctggaggatgagataggtaccataaagaacagagaagaaaatgagatg
gcaatgaatttaaataacattgcaccaacccatatggattgtggacaacagagggtgacc
ctgaattttctctag
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