Solanum stenotomum: 125868327
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Entry
125868327 CDS
T08385
Name
(RefSeq) transcription elongation factor TFIIS-like
KO
K03145
transcription elongation factor S-II
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125868327
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
125868327
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF2505
Motif
Other DBs
NCBI-GeneID:
125868327
NCBI-ProteinID:
XP_049404939
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Position
6:62284116..62286631
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AA seq
363 aa
AA seq
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MERELVELFEKVKQAADAAAVDGAGDSSPEESRCLDVLKQLKKFPVNYQVLVSSQVGKRL
RQLTKHPREKIQALASDVVQNWKNIIVRETLKNKNSNGVNGESVKDESAGATATANGATK
SQRAESVKVEKVSRVDDVKVERMTSKIEEVVKTESPFAEKNVGRVIVLKTEKSSSNVASA
ALPKLGALIYCKDSVRDKVRELLAEALCKVSGEVDEELRDEVNACDPYRVAVQVETAMFE
KWGRSSGAQKFKYRSIMFNIKDQNNQDFRRKVLLGKFPPRTITNLTPEEMASEERQKQNE
KIKEKALYNSELGAPVQASTDKFKCGRCKKSQCTYYQMQTRSADEPMTTYVTCVNCQNRW
KFC
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggagagggagctggttgagctgttcgagaaggttaagcaagctgctgatgcagctgcg
gtggacggcgccggagattcgtcgccggaggagagtagatgtcttgatgttttgaaacag
cttaagaagtttcctgtcaattatcaagtcctcgtatcttcacaggtggggaagcgtctt
cgacaattgacaaaacatccaagggagaagatccaggctttggcatctgatgtggttcag
aactggaagaatataattgtaagagaaacactgaaaaataagaacagcaatggagtgaat
ggggaatctgtaaaagatgaatctgctggtgctactgctactgctaatggagccactaaa
tctcagagagcagagtcggtgaaggttgaaaaggtgtctagggttgatgatgttaaagtc
gaaaggatgacttcaaaaattgaggaagtagtaaagacagaaagtccctttgctgagaaa
aatgttggacgcgttattgttctgaaaactgaaaagagtagctctaatgtggcaagtgct
gctctgccaaagttgggtgctctaatttattgcaaggattctgtgagggataaagttcgg
gaactccttgcagaggctttatgcaaagtctcaggtgaagttgacgaggaactgagggat
gaggtaaatgcatgtgatccgtatagagttgctgttcaggtagagactgcaatgtttgag
aagtggggtagatctagtggtgcccagaagttcaagtataggtctataatgttcaatatt
aaggatcaaaacaatcaagatttccggagaaaagttcttctggggaagttccctcctcgt
actattactaatctgacaccagaagaaatggcaagcgaagaaaggcaaaagcagaatgag
aaaatcaaagaaaaagcgttatacaatagtgaacttggagctcctgtacaggctagtact
gataagttcaagtgtggtaggtgtaagaagagtcaatgcacctactatcagatgcaaacg
cgaagtgcagatgaacctatgaccacatacgtgacatgtgtgaactgccaaaatcgctgg
aagttctgttaa
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