Solanum stenotomum: 125868436
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Entry
125868436 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125868436
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
sstn
Solanum stenotomum
Pathway
sstn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125868436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sstn03019
]
125868436
Messenger RNA biogenesis [BR:
sstn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
125868436
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
V-ATPase_H_N
Motif
Other DBs
NCBI-GeneID:
125868436
NCBI-ProteinID:
XP_049405041
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Position
6:6538167..6539758
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AA seq
308 aa
AA seq
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MSNYLPPRLSVFFFQHHSRAAHLIMELHYGHDREKVLMQLNEFIRQPRSESMRINLGYHL
SNSFDTEVIAAKPKFLDSTLTPRESSQVCNALSVFQVQESGSSKVASLFPDLLRGLRYGT
KKIHKILYPFLKETTNVMTPRQPVRLSILILIDALTKFDELHGHEILLLFLETQIFSSCL
HCIHHGDMPIKKVATLILMKILMQEEGLRCCYSRPDCLRSVMEVLGQLVETFSYQIPCSQ
HLKYVIRCFLSLSRVGWIPRVYETVRNGVPQRLIDNTFRVIIHVDPQIQNMLYQLLLNLN
LNPQQLLG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattatctgccgcctcgtctgtcggttttctttttccagcatcatagcagggca
gcacacttgataatggaacttcattacggtcatgatcgtgaaaaagttcttatgcaactc
aacgaattcatcagacaaccgagaagtgaatcaatgcgcatcaatcttggatatcacctg
tcgaactccttcgatactgaagtaatagcagcgaagcccaagtttttagactcaacatta
accccgagggaatcttcacaagtttgtaatgctctatcggtatttcaggtgcaagaaagt
ggctcgtccaaggtagcgtcgttgtttcctgatttgcttcgtggattgagatacggaaca
aaaaaaatacataaaattctttacccattcctcaaagaaactacaaatgtgatgacgcct
cggcaacctgtgaggcttagcatcttgattcttattgatgccctaacaaagtttgatgag
ttacatgggcatgaaattcttcttttatttctagaaacacaaatattttcttcctgcttg
cactgcattcatcatggtgatatgccgataaagaaggttgcaacactcatacttatgaaa
atcttgatgcaagaggaagggctaagatgttgttactctcgccctgattgtcttcggtca
gtgatggaagtcttgggtcaactggtagaaacattttcttatcaaatcccttgttcgcag
cacctaaaatatgttattcgatgcttcctaagtctttcgcgagtaggatggatacccagg
gtatatgaaacagtgagaaacggggttcctcaacgactaattgacaacacttttcgcgtt
attattcatgtagatccacagattcaaaatatgctgtatcagttattattgaatcttaat
cttaatccccaacaattgctcggatga
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