Solanum stenotomum: 125869064
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Entry
125869064 CDS
T08385
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
sstn
Solanum stenotomum
Pathway
sstn04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125869064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125869064
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
125869064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
PRIMA1
zf-C3HC4
NinF
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
125869064
NCBI-ProteinID:
XP_049405583
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Position
6:complement(59149931..59156935)
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AA seq
393 aa
AA seq
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MLFQVGGQGTRPTFFEMAAAQQLPSSLRAALSYSLGVLALRRPFIHKILDYEDECFALLT
LVLETHSLRTTDGSFAESLYGLRRRAVKIKVKGDNKGPDAREEINHTGLEKRQKVLSVVF
LVILPYLRSKLHSIYNKEREAALQASLWGTEDERFGDTDYFDGGGNSIVSTSSSDTEESV
RDRLRKKIRKIVAACYPWIHAGNEGLSFAYQLLYLLDATGFYSLGLHALGIHVCRATGQE
LMDTSSRISKIRSRERERLRGPPWLKAVQSALLSCAYGVLDYAQTGLIAAVFFFKMMEWW
YQSAEERMSAPTVYPPPPPPPPPKVAKEGIPLPTDRTLCPLCSQKRANPSVVAVSGLVFC
YSCVFRYVSQYKRCPVTLMPATVDHIRRLFHDV
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcaagtaggaggacaagggactcgtcctactttctttgaaatggctgctgca
caacagttaccttctagtcttagagctgctttaagttattcccttggtgttttagcttta
agaagacctttcatccacaaaatactagattatgaggatgagtgctttgctttgcttacg
ctagttcttgaaacacatagcttacgaactacagatgggtcttttgctgagtctttatat
ggcctgcgaagaagggcagttaagataaaagttaagggtgacaacaaaggtccagacgcc
agagaagaaattaatcacactgggttggagaagcgccaaaaagttctttcagttgtgttt
ctggttatattgccatatctcagatcaaaactgcattcaatctacaataaagaaagagag
gctgctcttcaagctagtttatggggcactgaggatgagagatttggtgacactgactat
tttgatggaggtggaaactccatagtttcaacaagcagttcagatacagaagaatcagtt
agagatcgtttgagaaagaaaatccgtaagattgtagctgcttgctacccatggatacat
gctggaaatgaaggtttatcatttgcttaccagctactgtatttgctggatgctactgga
ttttactctctaggactccatgctcttggcattcatgtttgtcgggctacaggacaggag
ctgatggatacttcttctaggatttctaaaataagaagccgtgaacgagagagacttcgt
ggccccccttggctaaaggcagtacaaagtgctttactaagttgtgcatatggagttctt
gactatgctcaaactggcctaatagcggcagtgtttttctttaaaatgatggagtggtgg
taccagtcagcagaagaaaggatgtcagctccgactgtttatccacccccacctcctcct
ccacctccaaaggttgcgaaagagggaattccactacctacagacagaacactgtgtcct
ttgtgctcacaaaagcgtgcaaatccctcagtggtggcagtttcaggattagtcttctgc
tattcctgcgttttccgatatgtctctcagtataagcgatgccctgtgacattgatgcct
gcaactgtggatcatatcagaagactatttcatgatgtttaa
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