Solanum stenotomum: 125869215
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Entry
125869215 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125869215 isoform X1
KO
K12822
RNA-binding protein 25
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125869215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125869215
Spliceosome [BR:
sstn03041
]
Complex A
U1 snRNP components
U1 related factors
125869215
Complex B
125869215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
DUF2749
Motif
Other DBs
NCBI-GeneID:
125869215
NCBI-ProteinID:
XP_049405737
LinkDB
All DBs
Position
6:complement(44594559..44601866)
Genome browser
AA seq
941 aa
AA seq
DB search
MADSAPSPENSAVANSQPPTESDNKTSQSDPSPAPSLSSPLPPPPPSIQPYSGIPPSFRP
ATPPAPLPGVGVAPMFSPLPNPNLQQQTLNFPNPSVQPPGVNSVPPSMIPAPTAGVGAVQ
MGSAPQIMPPYAMPGQMMRPYAPMPNGYHAMPQPAPQGAMIHPGIPRYASPYTQMARPVF
PPRPLGAVGIIPPLMRPPIPMMRPPIIPLVARPAAIPSITQTEKPQTTVYVGKISSTAEN
EFMLSLLQLCGPVRSWKRAQDPTNGSLKGFGFCEFEAAEGVLRALRLLNKLNIDGQELML
NVNQATRDFLERYVEKKAENSKKPKESETEGTEKEEESALGGETNENAKTPTEPPESSTE
ESKQDSGDKGNKENLDAANFGLVTDEDRQADKEALEKLKDMIEERLKNKPLPPPPPPPHP
QAPKDGSDNSYTENLNDGEPGRDTAKNEEKNDDVNESKTSSEHDKAEISSPDHRRQDRRS
RDRERDLKREKERELERYEREREQERTKREKEREYKTREDDRRYKSREKEWETREREREH
WRKREREREKERAQERKWDIVEQERECEDGYRKRKHRTSDEERKRRHREKEDDLADRSKE
VEEIAEAKRRADEEHQKKEQEEALKILSGHLANGREKAVSYEENNLDSQDKNIETAQDNL
SQGEGVAQNGTDEESVLAATAASDMRHNSNAPTKRLEFGLSGSGKRAAVPSFFNADEDED
TQKEKKMRPLVPIDYSADEQHLVQPSISEASPTTAAEFAKRISNVNAKEERPDVEKERHR
RTHDRSSQRDRDRHDEETNRTRDDSRNLDHDRVREPRPDKVKTPDNQKLLDAKQLIDMIP
KTKDELFSYEINWAIYDKNALHERMRPWISKKITDFLGEEEPTLVDYIVSSTQEHVKATE
MLERLQSILDEEAEMFVLKMWRMLIFEIKKVETGLALRPKS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcagctccttcgccggaaaattccgccgtcgcaaattcacaaccaccaacg
gaatccgataacaaaacttcccaatcagatccatctccggcaccgtcgttatcttcacct
ctgccaccacctccgccgtcgatccagccttactctgggatacctccgtcgtttcgtccg
gcgacgccaccagcaccactacctggtgttggtgtagctcctatgttctcgcctcttcct
aaccctaacttgcagcagcaaacattgaattttccgaatccttctgttcagcctcccgga
gtgaattctgtgccgccgtcgatgattccagcacctacagctggtgttggagctgtacag
atgggttcggctccgcaaattatgccgccttatgctatgcctggacagatgatgagaccg
tacgctcctatgcctaacggttaccatgctatgcctcagcctgctccacagggcgccatg
attcatcccggaattccgcgttatgcatcaccgtacacacagatggctcgaccagtgttt
cctccacgcccactaggtgcagtaggcattattcctcccttgatgcgccctccaatccct
atgatgcgtcctccaatcattcctcttgttgccaggccagctgccatcccaagcattact
caaacagagaaaccacaaacaacagtttatgttggcaagatatcgtccactgcagaaaat
gagtttatgctttctcttttgcagctctgcgggcctgttaggagttggaagcgtgctcaa
gatccgactaatggatcactgaaaggttttgggttttgtgagtttgaggctgctgaggga
gttctccgtgcattaagattgctcaacaaattaaacatcgacgggcaggagctaatgtta
aatgtcaatcaagcaactcgcgatttccttgaacggtatgttgaaaagaaagcagaaaac
tcaaagaaacccaaagaatctgaaactgaaggcactgagaaagaagaagaaagtgcatta
ggtggggagacgaatgaaaatgcaaagacgcccacagaacctcctgagtctagtacagaa
gaatcaaagcaagatagtggtgataaagggaacaaagaaaatctcgatgctgctaacttt
ggtctggtcactgacgaagataggcaagctgacaaagaggccttggagaagctcaaggat
atgatagaggaaaggctgaagaataaaccattaccacctccacctccacctccacatcca
caagcacctaaagatggttctgataactcatatacggaaaacctcaatgatggggaacca
ggtagagatacagcaaaaaatgaagaaaaaaatgatgatgtcaacgaaagtaaaacttca
agtgagcatgacaaggccgagattagctcaccggaccatcgtaggcaagataggagaagc
agggatcgggagagggatttgaagagggaaaaggaaagggaactcgaaaggtatgagaga
gaacgtgaacaagaacgaactaagagagagaaggagagagagtacaagacccgcgaagat
gaccgtaggtacaagtcccgtgaaaaagagtgggaaacaagagaaagggagagggaacat
tggcgaaaaagagagagagaaagggagaaagaaagggctcaggaacgcaaatgggatata
gtggaacaagaacgtgaatgtgaagatggttatagaaaaagaaaacacaggactagtgac
gaggagaggaaaagacggcatagggagaaggaagatgacttggccgacaggtctaaagaa
gtagaagagattgctgaggctaagagaagagcagacgaggaacatcagaaaaaagaacag
gaggaggcattgaaaatcctttctggtcatctagccaatggacgtgaaaaagctgtttca
tatgaggaaaacaatcttgatagccaagataagaatatcgagactgctcaggataattta
agccagggtgaaggagttgcacaaaatgggactgatgaagaatccgtgttggcagctact
gcagcatcagacatgaggcataatagcaatgcccctacgaaaaggttagaatttggcctc
tcaggctcaggaaaaagagctgctgtcccgtctttcttcaatgcggatgaggatgaggat
actcaaaaagaaaagaaaatgaggccattggttccaattgactactcagctgacgagcaa
catctggtccaaccttccatctctgaagcatcgccgactacagctgcagaatttgctaag
cgaatttcaaatgtcaatgctaaagaagagaggcctgacgtagagaaggagagacataga
agaactcatgacagatccagccagagggatcgggacaggcatgatgaggagactaaccga
accagggatgacagtagaaaccttgatcatgacagagttcgggaacctagacctgataag
gttaagacgcctgataatcagaagcttttagatgcaaagcaattgattgacatgattcca
aagaccaaagatgagttgttctcttatgagataaactgggctatttatgacaagaatgca
ttgcatgaaaggatgagaccgtggatcagtaagaagatcactgattttcttggtgaggag
gagccgacgctggtagactacatcgtctccagcactcaagaacatgtcaaggcaactgag
atgctggagaggctccaaagtatattagatgaagaagctgaaatgtttgttctgaagatg
tggaggatgcttatatttgaaatcaagaaagttgagacaggtttggctttgaggcccaaa
tcctaa
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