Solanum stenotomum: 125869439
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Entry
125869439 CDS
T08385
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125869439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125869439
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125869439
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125869439
NCBI-ProteinID:
XP_049405979
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Position
6:3178829..3182912
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AA seq
671 aa
AA seq
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MRSVKRRIERGSERISRRKPVRVHRVTKDQSVASNKRVLDPQGQFLQKWNKVFILACIFA
VSLDPLFFYIPVIDDKNKCLDLDKTLKITVCVLRSITDLFYIFHIILKFRTGFIAPSSRV
YGRGELIEDSSAIAKRYLLSYFIVDVVAVLPLPQIVIWIIAPNVNGPIALVTKEMLKIVI
FAQYVPRFFRIYPLSKEIERTTGFFNESALGRAVFNLFLYMLYSNGIGAFWYLFSIERQD
TCWRNACDKIPNCSSDYLYCGGKMNGNAFLLNSSCPPLQQEDIKDPNEFDFGIALNALQF
QVVEKRKFRTKLLYCFWWGLRNLSSLGQNLKTSTFDGDIIFAIFISVIGLILFSLIIGNM
QKFMQSNLVRVEEMRARRRDIELWMSHRMLPDNLRERIRRHEQYKWQETKGVEEDSLIQN
LPRDLRRDLKRHLCWSFLKKVPIFEKMDKQLLDALCDRLKPALFTDKSFIMREGDPVEEM
HFLMRGTLLTMTTNGGRTGFFNSVHLKAGDFCGDELLTWALDPHTSSSSLPISTRTVQAV
TDIEAFALTDDDLKFVASQFKRLHSKQLQHTFKYYSQQWRTWAACFIQVAWRRHFRKKLK
KSLREEEDKLQVALAKASTNASSLGATIYASRFAANVLRTLRHNNTTGTKSSLTLPLLLH
KPAEPDFSEKK
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcgttaaaagaaggattgagaggggttctgaaagaattagtaggagaaaacca
gttcgcgtccatcgtgtaacaaaagatcaatctgttgcatcaaacaagagagttcttgat
cctcagggtcaatttcttcagaaatggaacaaagtatttatattggcttgtatatttgcg
gtgtcacttgatccgttattcttctacattcctgttattgatgacaaaaataagtgccta
gatttggacaagacgttaaagatcactgtttgcgttctgcgttctatcactgatcttttc
tatatctttcacattatcttgaaatttcgtactggcttcattgctccttcttctcgagtt
tatggaaggggtgagttgattgaagattcctctgctatagccaagcgatatttgttatcg
tatttcatcgttgacgttgtagcagtccttccactcccacagattgtgatatggattatc
gctcccaacgtgaatggccccattgctctggtgacgaaagaaatgttgaagattgtaatt
tttgctcaatatgttccaagattttttagaatttatccattgtccaaagaaatagaaagg
actacaggcttctttaatgaaagtgcattgggtagagctgttttcaaccttttcctctac
atgttgtacagtaatggaattggagccttttggtatttgttctcaatagaacgccaagat
acatgctggcgcaatgcgtgtgacaagatccccaactgttcgtcagactacttatattgt
ggaggaaaaatgaatggaaatgcttttttactgaactcttcttgccctcccctgcaacaa
gaagatataaaagatccaaatgaatttgattttggaatcgcactcaatgctcttcagttt
caggttgttgagaaaagaaaattccggaccaaactcttgtattgcttttggtggggactg
agaaacttaagttctcttggccaaaaccttaagacaagcacctttgatggagatattatc
tttgccatcttcatctcagttattgggcttatcttgttttccttgattattggcaatatg
cagaaatttatgcaatctaatctggttagagtagaagagatgagagcgagaaggcgggat
atcgaactgtggatgtctcatcgcatgcttcctgacaatctgagagagcgaataagaaga
catgaacagtacaaatggcaagaaactaagggagttgaggaagattcactcattcaaaat
cttcctagagacttgaggagagatttaaagcgacatctctgttggtcttttctcaaaaaa
gttcccatatttgagaaaatggacaaacaattactggacgcattgtgtgacagactgaaa
ccagcactcttcacagataagagcttcataatgcgagaaggcgatccagtagaagaaatg
cactttctaatgagaggtacactgttaactatgaccacaaatggtggaaggactggtttt
ttcaactctgttcatctcaaggctggcgacttctgtggagatgagcttttgacatgggct
ttagaccctcatacttcctccagtagtcttccaatttcaactagaacagtgcaggctgta
actgatatagaagcttttgcactcactgacgatgacctcaagtttgtcgcctcacaattt
aaacgtctgcatagcaaacaacttcagcatactttcaagtactactcacaacaatggagg
acatgggctgcatgctttatacaagtagcatggcgtcgacacttcaggaaaaaactcaag
aaatccttaagagaggaagaagataaactgcaggttgcattagctaaagcgagcacaaat
gcatcaagtcttggagctaccatatatgcatcaaggtttgcagctaatgtactacgcacc
ttgcgacacaacaacacaactggtaccaaatcatctctcacattacctttactgcttcat
aaaccagctgaaccagattttagtgagaaaaaatga
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