Solanum stenotomum: 125869444
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Entry
125869444 CDS
T08385
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sstn
Solanum stenotomum
Pathway
sstn04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125869444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125869444
Ion channels [BR:
sstn04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125869444
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125869444
NCBI-ProteinID:
XP_049405985
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All DBs
Position
6:3242514..3247354
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AA seq
713 aa
AA seq
DB search
MFEDRKSEQSSFSIDHKSSSTNRPFHVRKPSASSLMRSVKRRIERGSERISSRRKPVRVH
RVTDKLTKDQSVASNKKVLDPQGRFLQKWNKVSILVCVFAVSLDPLFFYISVIDNKNKCL
DLDKTLKITACVLRSITDIFYVFHIILKFRTGFIAPSSRVYGRGELIEDSSAIAKRYLLS
YFIVDAVAVLPLPQIVILFIAPNVNGSIALVTKEMLKIVIFAQYVPRFFRIYPLSKEIER
TTGFFNKSALGGAVFNLFLYMLSSNVIGAFWYLFSIERQDTCWRNACDKIPNCSSDYLYC
GGKMNGNAFLLNSSCPLLQQEDIKDPNEFDFGIALDALQFQVVEKRKFRTKLLYCFWWGL
RNLSSLGQNLKTSSFDGDIIFAIFISIVGLILFSLIIGNMQKFMQSNLVRVEEMRMRRRD
VEQWMSHRMLPVDLRDRIRRHEQYKWQQTKGLEEDSLIQNLPRDLRRDLKRHLCWSLLKR
VPIFEKMDKQLLDALCDRLKPALFTDKSFIIREGDPVEEIHFLMRGTLLTMTTNGGRTGF
FTSVHLKAGDFCGDELLTWALDPHTSSSSLPISTRTVQAVTDIEAFALTADDLKFVASKF
RRLHSKQLQHTFKYYSQQWRTWAACIIQVAWHRHFRKKLKKSLREEEDKLQVALAKESTN
ASSLGATIYASRFAANLLPALRRNNTTGTKSSPTLPLLLHKPAEPDFSEKNDS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggaccggaagtcagaacaatcatccttcagcattgaccataaaagttcgtca
actaataggccatttcatgtcagaaaaccatcagctagctcgttgatgagaagcgttaaa
agaaggattgagaggggttctgaaagaataagtagcaggagaaaaccagttcgcgtccat
cgtgtaactgataagctaacaaaagatcaatctgttgcatcaaacaagaaagttcttgat
cctcaggggagatttcttcagaaatggaacaaagtatctatattggtttgtgtatttgca
gtgtcacttgatccgttgttcttctacatttctgttattgataacaaaaataagtgccta
gatttggacaagacgttaaagatcactgcttgcgttctgcgttctatcactgatattttc
tatgtctttcacattatcttgaaatttcgtactggcttcattgctccttcttctcgagtt
tatggaaggggtgagttgattgaagattcctctgctatagccaagcgatatttgttatct
tatttcattgttgatgctgtagcagtccttccactcccacagattgtgatattgtttatc
gctcccaacgtgaatggctccattgctctggtgacgaaagaaatgttgaagattgtaatt
tttgctcaatatgttccaagattttttagaatttatccattgtccaaagaaatagaaagg
actacaggcttctttaataaaagtgcattgggtggagctgttttcaaccttttcctctac
atgttgtccagtaatgtaattggagccttttggtatttgttctccatagaacgccaagat
acatgctggcgcaatgcgtgtgacaagatccccaactgttcgtcagactacttatattgt
ggaggaaaaatgaatggaaatgcttttttactgaattcttcttgccctctcctgcaacaa
gaagatataaaagatccaaatgaatttgattttggaatcgcactcgatgctcttcagttt
caggttgttgagaaaagaaaattccggaccaaactcttgtattgcttttggtgggggctg
agaaacttaagttctcttggccaaaaccttaagacaagttccttcgatggagatattatc
tttgccatcttcatctcaattgttgggcttatcttgttttccttgattattggcaatatg
cagaaatttatgcaatctaacctggttagagtagaagagatgagaatgagaaggagggat
gtagaacagtggatgtctcatcgcatgcttcctgtcgatctgagagatcgaatcagaaga
catgaacagtacaaatggcaacaaaccaagggacttgaggaagattcactcattcaaaat
cttcctagagacttgaggagagatttaaagcgacatctctgttggtctttgctcaaaaga
gttcccatatttgagaaaatggacaaacaattactggacgcattgtgtgacagactgaaa
ccagcactcttcacagataagagcttcataatccgagaaggcgatccagtagaagaaata
cactttctaatgagaggtacactgttaactatgaccacaaatggtggaaggactggtttt
ttcacctctgttcatctcaaggctggcgacttctgtggagatgagcttttgacatgggct
ttagatcctcatacttcctccagtagtcttccaatttcaactagaacagtgcaggctgta
actgatatagaagcttttgccctcactgcggatgacctcaagtttgtcgcctcaaaattt
agacgtctgcatagcaagcaacttcagcatactttcaagtactactcacaacaatggagg
acatgggctgcatgcattatacaagtagcatggcatcgacacttcaggaaaaaactcaag
aaatccttaagagaggaagaagataaactgcaggttgcattagctaaagagagcacaaat
gcatcaagtcttggggctacgatatatgcatcaaggtttgcagctaatctgctacccgcc
ttgcgacgcaacaatacaactggtaccaaatcatctcccacattacctctactgcttcat
aaaccagctgaaccagattttagtgagaaaaatgattcatga
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