Solanum stenotomum: 125870039
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Entry
125870039 CDS
T08385
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sstn
Solanum stenotomum
Pathway
sstn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125870039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125870039
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125870039
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
HECT type E3
125870039
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
DUF4371
Motif
Other DBs
NCBI-GeneID:
125870039
NCBI-ProteinID:
XP_049406362
LinkDB
All DBs
Position
7:complement(53539629..53559638)
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AA seq
1278 aa
AA seq
DB search
MSEPRKNQVSLRGSSAKEISRDVLLEKVSQERALRNFTRRATAAARLIQVSESGFISLKI
ASTCSLESIVGVRSLVDEPTDEDGENINQGGGNVFSTKGFTNWHSKDSFATHIGPPNSVH
NQSKRKCEDIMREQQSIQAAFYKLDDKNVLGITNDLNASLQKKEQGIANAMILVKVEAFY
IKHVISLPNFDDPYANSERSRRKVVICTTLHHYRVDVFYKIIDWQLQELNDRFNEVTSDL
LNGVSCLNPIDSFSSFDIKKIMRMAEIYPDDFDGSNMRALENQLVNYIIDVCDIDERFSN
LRGLGELSRKLVETKKHLTYSLVFLLVKFALLLVVATATVERAFRQSRVKKQTRSTNCHI
PIFSNLNSFHAFXTTASAITLALRPFHVMNLVADNKNDLLEVQSAAEQYCIYLLTIPWFA
QRLPVVLIPPLKHKSVLTPCLRILLMSKEQILKDMSDMDQMTSSSHNRVMPPVGWALGNF
IYLAAGSESNNLDSGKLVSGLDRQSYVRVVIMLMEKLLSQIERAGWVRKENQEVQGDGNS
VEVETTFGSLKMSYMSLFKPVWLQRHLMELLVLEKDGLIQKAESLPLCRAESSGSCELLD
VAYYYSWMLRIFSILNPVLGAMPVLNMLSFTPGFLSNLWGTLNESLFQGKNLVSKGKYLD
ESTISENKILEASERKQKHSSKDIGSKWASVFQKITGKSQTEFKSVDPVDGKSKAVHIDK
HYPDMWDIELLRQGPDGLSKDLSCLLHLFCASYSHLLLVLDDLEFYEKQVPFTLEQQQKI
VSVLNTLVYNTMSHSTGPKTRPLTDSAIKCLHLLYERDCRHQFCPPTLWLSPGRNNRPPI
AVAARTHEVLSATSNGDDASTTLSMGSIITVIPHIFPFEERVEMFREFINMDKASRKMAG
EVLGPGGRSVEIVIRRGHIIEDGFQQLNNLGSRLKSGIHVSFVNESGLPEAGLDYGGLSK
EFLTEIAKAAFSPEYGLFTQTFTSDRHLIPNTAARFLDNGIQMIEFLGRIVGKALYEGIL
LDYSFSHVFVQKLLGRYSFLDELSTLDPELYRNLMYVKHYDGDVKDLALDFTVTEESLGK
HIVIELKPGGKDISVTKENMLQYVHAMADFKLNRQILPFSNAFYRGLTDLISPSWLKLFN
ASEFNQLLSGGNHDIDIDDLRKNTRYTGGYTEGSRTVKLFWEVFASFEPKERCLLLKFVT
SCSRAPLLGFKYLQPTFTIHKVSCDLPLLATFGGQDVDRLPSASTCYNTLKLPTYKRQNT
LRAKLLYAINSNAGFELS
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacctcgaaagaaccaggtttcattgcgaggctcaagtgcgaaggagatttcg
agggatgtgcttttggaaaaagtttcacaagagagagcgttgaggaattttactcggcga
gctactgctgccgcgcggttaattcaggtcagtgaatcgggatttattagcttaaaaata
gcctccacttgctctttggaatccatagttggtgtacgaagtcttgtagatgagcctact
gatgaagatggagaaaacattaatcaaggtggtggtaatgtattttcgactaagggattt
acaaattggcatagcaaggatagttttgctacacatattggtccaccgaatagcgttcat
aatcaatccaaaagaaagtgtgaagatatcatgcgagaacaacaatccattcaagccgca
ttttacaagttggatgataaaaatgttttaggaatcacaaatgatcttaatgcttcatta
cagaaaaaggagcaaggcattgcaaatgccatgattcttgtaaaggtagaagcattttat
atcaagcatgtcatttcattacccaattttgatgatccatatgctaattctgagagatca
cgacgtaaagtagttatttgtactactttgcatcattatcgtgtggatgtgttttataaa
atcattgattggcaactacaagaacttaatgatcgttttaatgaggtgacaagtgatttg
cttaatggagtatcttgcttgaatccaattgattcattttctagttttgacataaagaag
ataatgagaatggctgaaatatatcctgatgattttgatggctccaacatgagagctctt
gagaatcaacttgttaattatattattgatgtttgtgatattgatgaaaggttctccaat
ttgagaggacttggagaactttcaagaaagttggttgagacaaagaagcatttaacttat
tctctcgtatttcttttagtgaagtttgctttacttctagttgttgccactgctacagtt
gaaagagcttttcgacagagtcgggtcaaaaaacaaacccgctcaaccaattgtcatatc
cccatattctcaaatctcaattcatttcacgcttttgngacaactgcaagtgcaattact
ttagcactacggccatttcatgtcatgaatctagttgcggataataaaaatgacttgcta
gaagttcagagtgctgcggagcaatactgtatttatctactcacaataccctggtttgct
caacggttaccagtggtgttgattcctcctttgaaacacaagtctgtgttaacaccttgc
ttgaggatactattgatgtcaaaggagcaaattctaaaggatatgtcagatatggatcag
atgacaagttcttctcacaacagggtgatgccaccagttggttgggctcttggaaatttt
atataccttgctgcaggcagtgaaagcaataacttagattctggaaagttagtgtctggt
ttagaccgtcaatcctatgtccgtgtagtgattatgctgatggagaaattattgtctcag
attgaaagggctggatgggtgagaaaggagaaccaagaagttcaaggtgacggaaattct
gttgaagtcgagacaacttttggatccttaaagatgtcgtatatgagcctctttaagcct
gtttggctgcagaggcatctgatggaacttttagtgttggagaaagatggtctcattcag
aaagctgaaagtttacccttatgcagagcagaatcttcggggagctgtgaattgctcgat
gttgcttactactattcatggatgctcagaatattttctattttgaatccggtgctaggg
gcaatgccagtcctcaacatgctgtcttttactcccgggtttctttccaacctgtgggga
accctcaatgaatcactttttcaaggaaagaatcttgtcagtaagggcaaatatttggat
gaaagtacaatttctgaaaacaagattcttgaagcttctgagagaaagcaaaaacattct
tctaaagatataggcagcaaatgggctagcgtatttcaaaagataactgggaaatcacaa
actgagttcaaaagtgtggatccagttgatggaaaatcaaaagcagtgcacattgacaag
cattatcctgatatgtgggacattgaattgctaaggcagggtcctgatggcctatcaaaa
gatttgtcttgtctactacatctgttttgcgctagttattcacacctgttgttagttctt
gatgacctagagttttatgagaaacaggtcccctttacattggagcagcagcagaaaatt
gtgtcggtgctgaatacattggtttataatacaatgtctcacagtactggtcctaaaact
agacctctgacagattctgctatcaaatgtcttcatttattgtatgaaagggattgcagg
caccaattttgccctcccactttgtggctttcaccaggtagaaataatcggccacccatt
gctgtagctgctaggactcatgaagttttgtcagctacttcaaacggtgatgatgcctca
accactttgagcatgggctccatcattactgttatcccacacatcttcccatttgaagaa
agggttgagatgtttagagaattcatcaacatggataaggcatcgagaaaaatggctggt
gaagttcttggacctggtggacgttccgtcgagatagtaattcgtcgtggtcatattatt
gaagatggatttcagcaactaaataacttaggatcaaggttaaagtccggcatccatgtc
tctttcgtgaatgagtctggtcttccagaggctggcctggactatggtgggttatccaag
gaattcttgacagaaatagccaaagcagccttctcacctgagtatgggctattcacacag
accttcacttcagatagacatctaattcctaatacagctgcaagatttttggacaatgga
attcagatgatcgagtttctggggagaatcgttggcaaagcactctatgaaggaatattg
ctagattattccttttcacatgtttttgtccaaaagctgttgggccgctatagctttctt
gatgaattgtctacacttgatcctgagctatacaggaatcttatgtatgttaagcactat
gatggtgatgtcaaggacctcgcattggattttacagttactgaggagtcattggggaaa
cacattgttattgagcttaaacctggtggcaaggatatttctgtaacaaaagaaaacatg
ttgcaatatgttcatgcaatggcagattttaaattaaatcggcagatacttcctttctca
aatgcattttatagaggactgacggaccttatatccccttcctggttaaagttgtttaat
gcaagtgaatttaatcagttgctttcagggggaaaccatgatattgacattgatgattta
aggaagaatacacgctatactggaggttacaccgaaggaagtcggacagttaaactcttt
tgggaggtatttgcgagttttgaaccaaaagaacggtgtttgctgcttaagtttgtgaca
agttgttcgcgagctcctttgcttggattcaaatatctgcagccaaccttcaccattcac
aaggtttcttgtgatttgcctctattggcgacattcgggggacaggatgttgatcggctt
ccttcagcgtctacttgctacaacaccctcaagcttccaacatacaaacgccagaatacc
ttgagagcaaagcttctgtatgctatcaattccaatgctggtttcgaactttcataa
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