Solanum stenotomum: 125870174
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Entry
125870174 CDS
T08385
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sstn
Solanum stenotomum
Pathway
sstn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125870174
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sstn02000
]
125870174
04147 Exosome [BR:
sstn04147
]
125870174
04090 CD molecules [BR:
sstn04090
]
125870174
Enzymes [BR:
sstn01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
125870174
Transporters [BR:
sstn02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
125870174
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125870174
CD molecules [BR:
sstn04090
]
Proteins
125870174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_29
AAA_5
nSTAND1
AAA_15
AAA_25
APS_kinase
DUF815
DUF87
Rad17
DUF4349
Motif
Other DBs
NCBI-GeneID:
125870174
NCBI-ProteinID:
XP_049406480
LinkDB
All DBs
Position
7:complement(52702035..52709375)
Genome browser
AA seq
1333 aa
AA seq
DB search
MSQDSEEIKTIEHWKWSEMQGVELVVSEDKNSNSPTTTTTTTTNSHQFQETRMEVKKEEG
GDVEKPSSPPPAVGFGELFRFADGLDCVLMIIGSLGAFVHGCSLPLFLRFFADLVNSFGS
YANDVDKMTQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQTTKMRIKYLEAALNQD
IQYFDTEVRTSDVVSAINTDAVVVQDAISEKLGNFIHYMATFLSGFVVGFTAVWQLALVT
LAVVPLIAVIGAIYTMTSAKLSSQSQEALSKAGNIVEQTVVQIRTVLAFVGEAKALQAYT
AALRVSQKIGYKSGFSKGLGLGATYFTVFCCYALLLWYGGYLVRHHFTNGGLAIATMFAV
MIGGLALGQSAPSMTAFAKARVAAAKIFRIIDHKPSVDRNAKTGLELDTVSGQLELKNVE
FSYPSRPEIKILNNFNLVVPAGKTIALVGSSGSGKSTVVSLIERFYDPTSGQLMLDGNDI
KTLKLKWLRQQIGLVSQEPALFATSIKENILLGRPDATQIEIEEAARVANAHSFVIKLPD
GFDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQEALDRFMI
GRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGSHDELMSKGENGMYAKLIKMQEAAHETA
LSNARKSSARPSSARNSVSSPIITRNSSYGRSPYSRRLSDFSTSDFSLSLDAAYSNYRNE
KLAFKDQASSFGRLAKMNSPEWTYALIGSIGSVICGSLSAFFAYVLSAVLSVYYNPDHAY
MSEQIAKYCYLLIGVSSAALIFNTLQHYYWDVVGENLTKRVREKMLAAVLKMEMAWFDQE
ENDSSRIAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRLALVLIGVFPV
VVAATVLQKMFMKGFSGDLEAAHAKATQLAGEAVANVRTVAAFNSETKIVNLFDSSLQTP
LRRCFWKGQIAGSGYGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRVFMVLMVSANG
AAETLTLAPDFIKGGRAMRSVFELLDRKTEVEPDDPDATAVPDRLRGEVEFKHVDFSYPT
RPDVSIFRDLNLRARAGKTLALVGPSGCGKSSVISLIERFYEPSSGRVIIDGKDIRKYNL
KSLRRHIAVVPQEPCLFATTIYENIAYGHESATEAEITEAATLANAHKFISALPDGYKTF
VGERGVQLSGGQKQRIAIARAFLRKAELMLLDEATSALDAESERCVQEALDRACAGKTTI
VVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYSDGIYARMIQLQRFTHGEAVNMAT
GSTSSSRPKEDQD
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagattctgaggagataaaaaccattgaacattggaaatggtctgaaatgcaa
ggtgttgagcttgttgtctctgaagacaaaaattcaaacagccccacaacaacaacaaca
acaacaacaaatagtcatcaatttcaagaaacaagaatggaggttaaaaaagaagaaggg
ggtgatgtggagaagccaagtagtccaccaccagcagttggttttggtgaactttttaga
tttgctgatggtttggattgtgtactaatgataattggttcacttggtgcttttgtccat
ggatgttctttgcctttgtttcttagattctttgctgatcttgttaattcttttggctct
tatgctaatgatgttgataagatgactcaagaagttttaaagtatgcattttactttctt
gtggtgggtgctgcaatatgggcatcttcatgggcagagatatcatgctggatgtggact
ggtgagagacaaacaacaaagatgaggatcaaatacttagaggctgctttgaaccaagat
attcaatattttgatactgaagttagaacttctgatgttgtttctgcaattaacactgat
gctgtagtggtccaagatgccattagtgagaagttgggcaatttcattcattatatggct
acatttttgtctggatttgtggtgggatttacagcagtatggcaattagctctagttact
cttgctgtagttccacttattgctgtaattggtgctatctacactatgacatcagccaaa
ttgtcaagtcaaagtcaagaagcactttcaaaggcagggaacattgttgaacagacagta
gttcaaattcggacggtattggcgtttgttggtgaggcaaaagcattgcaagcatacaca
gcagcacttagagtttctcaaaagattggatataagagtggattttcaaaaggattagga
cttggagctacatattttactgttttctgttgttatgctcttcttttatggtatgggggc
tatttagttagacatcatttcaccaatggaggacttgccatagcaacaatgtttgcagtc
atgattggtggattggcattgggacaatctgcccctagcatgactgcatttgcaaaggct
agagttgcagctgccaagattttccggattattgatcataagccaagcgtcgacagaaac
gccaagacggggttggagttagacactgttagtggccagctagagcttaagaatgtcgaa
ttctcttatccttcaaggcctgaaatcaagattctcaacaatttcaaccttgttgttcct
gctggaaagaccatcgctttagtcggaagcagtggttcggggaaaagcactgtggtatcc
cttatcgaaagattttatgatcccacctcaggacaacttatgcttgatggaaatgacata
aagacactgaaattgaaatggctaaggcagcaaattggccttgtaagccaagaaccagca
cttttcgcaacaagcatcaaagaaaacatactattaggaaggccagatgcaacacaaatc
gagatcgaagaagctgctagagttgccaatgcccattctttcgtaatcaaacttcctgat
ggttttgatactcaggtaggggagagaggattacaattatccggtggacagaagcagagg
attgctatagcaagggccatgcttaaaaacccggccatccttcttttagatgaggcaact
agtgctttagattctgaatcggaaaaactagtgcaggaggctctagacaggttcatgatc
ggacgaacaactcttgtgattgctcatcggctgtctactatccggaaggctgacctggtg
gcggtactacaacaaggcagtgtctcggagattggaagccacgatgagcttatgagtaaa
ggagagaatggtatgtatgccaagctcatcaaaatgcaagaagcagctcatgaaaccgct
cttagtaatgccagaaagagcagtgcaaggccctcgagtgcaaggaactctgtaagctca
ccaatcatcactagaaactcttcctacggtcgatcaccatactcccgccggttgtctgac
ttttctacctcggacttcagcctctcccttgatgctgcatattctaattaccgaaatgaa
aagcttgcattcaaggaccaagctagttcgtttggccggcttgcaaaaatgaactctcct
gagtggacttatgctttaattggttctataggctctgtcatctgtggttcacttagtgct
ttctttgcatacgtcttgagtgctgttcttagcgtgtactacaatccggatcatgcttac
atgagcgaacaaattgcgaaatactgttatcttttgattggagtttcatcagctgcactc
attttcaacactctacagcattactactgggatgtagtgggggagaatttgacaaaacgg
gtgagagagaaaatgctggcagcagtgcttaaaatggaaatggcgtggttcgatcaggaa
gagaacgatagttcaagaattgcagctaggctctctctggatgccaacaatgttaggtca
gccatcggggatagaatctccgtaattatgcagaactcagctctcatgctagttgcgtgc
actgcaggattcgtattgcagtggcgtctggccctcgtcctcattggggtcttccccgtg
gtcgttgcagcaacagttttacagaaaatgttcatgaagggattctcaggagacttggaa
gctgctcatgccaaagccactcaacttgctggagaagctgtagctaatgtaagaacagtt
gctgcctttaattcggagacgaaaatagtcaatcttttcgactccagcctccaaactccg
cttaggcgttgcttctggaagggacagattgcgggaagtggttatgggattgctcaattt
ttgctttatgcttcctatgcccttggcctttggtatgcctcctggcttgtcaagcacggg
atctctgacttctcgaagacgatccgtgttttcatggtgctcatggtttctgctaatggt
gcagccgaaacattgaccttagcccctgacttcatcaagggtggcagagcaatgcgttct
gttttcgaactccttgaccgtaaaacagaagttgagccagatgatccagatgccaccgct
gtccccgatcgtcttcgtggtgaagtggaatttaagcatgtagacttctcatatcccact
agacccgacgtgtcaattttccgtgatttgaatcttcgtgctcgagctggaaagactctt
gctcttgttggaccaagtggatgtggaaagagctcagtcatttcacttatagagcggttc
tacgagccatcatctggacgtgtcatcatcgatggcaaggatattcgtaagtacaacctt
aaatccttgagaagacacattgctgtagtgccacaagaaccttgcctctttgctaccacc
atctatgaaaacattgcgtatggacatgaatcagcaaccgaggctgagataaccgaagca
gcaaccttggcaaacgcccacaagttcatatctgcattgcctgatggatacaaaacattc
gttggagaaaggggagttcaattgtctggtggacaaaagcaaagaatcgccattgctcgt
gctttcctaaggaaagcagagctaatgctgctagatgaagcaacaagtgcactcgatgca
gagtctgaaagatgtgtacaagaagcattggatcgcgcttgtgctggtaagaccactatt
gttgttgcacataggctatctacaatcagaaatgcacatgtgatcgcggtcatagacgat
gggaaagtagcagaacaaggttctcattctcatctgttgaaaaactactcagatggtatt
tatgcgcgtatgatacaactacaacgatttacacacggagaagctgtgaatatggcaaca
ggatcaacatcttcctcgcgtcctaaggaagatcaagattga
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