Solanum stenotomum: 125870179
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Entry
125870179 CDS
T08385
Name
(RefSeq) uncharacterized protein LOC125870179
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125870179
Enzymes [BR:
sstn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125870179
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125870179
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
Beta-prop_SPT8
zf-C3HC4_2
zf-RING_11
GcpE_C
zf_RING_Vps8
zf-RING_Vps41
BSP_II
Motif
Other DBs
NCBI-GeneID:
125870179
NCBI-ProteinID:
XP_049406487
LinkDB
All DBs
Position
7:complement(52846731..52857412)
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AA seq
643 aa
AA seq
DB search
MAGDSDGTDPDYERFLRQIGDAAVDESELAAGDIILLEDGEEEEEEEETDEDEEEDEEEE
EEEEEEEESSTGRRTLRRVLYGDRGAARISSPERVINVENLDNSAVESGDDTSRSKEEET
ASQNADKEEGGGSGVGEEWNRSEIDGLFCSICMEAWTNDGDHQICCLPCGHLYGLSCIKK
WLKQKGRLGKCPQCNKKCTVKGIRVLYASRLHAVDEELQKKIRSLEASCFSLEKECTDWC
KKELEWRRREVELHKQVEHLKERTTEGSTTEMQSRSSVRIFGCNINGKSEKREYANSFLL
QKEIQIDGARLFDVDINGENLMIARRLSGMGGQHMLTKVSLLPPHEREDILLPASMKTIK
DLHVSPHDRVILLASLGKKLSILSSENNHTVLTYDLPTVPWSCAWDANNSQYMYAGLQNG
MVLQFDRRQTTRPVESMTGLTGNPVHTVHSLTSPTLGDGVRSVLSASSVGLCHWNFDSGD
ERPCLVPESENQGICISLACGDRNDDIVASFRPKLEISGDMAASQVLPTPVSTMEQAVYG
SHVLYRRVGSRYQKLGVSCAKVSAIRLPKTAIIDRGKKNPMFASGDDATMELVLQELPSL
NVAQRIKSLNGPVRDVRYARLQNSVLLGCLSEDKLLLCSHKLQ
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgacagtgacggtacagatcccgattacgagaggtttctccgtcaaatcggc
gacgccgccgtcgacgagagtgaacttgccgccggtgacattattttgttagaagatgga
gaagaagaagaggaagaagaagagacggatgaagacgaagaagaagatgaagaagaggag
gaggaggaagaagaagaagaagagtcgagtactggaaggaggacgttgcgtagggttttg
tatggagatcgtggtgctgcgaggatttcatctccagagcgggtgattaatgttgagaat
ttggataattctgctgtggaaagtggagatgatacgagtaggagcaaagaagaggaaacg
gcgtcgcagaatgctgataaggaagaaggcggtggaagcggtgtaggagaggagtggaat
cgaagtgaaattgatggtttgttttgttctatttgtatggaagcttggacaaatgacggt
gaccaccaaatttgctgtcttccttgtgggcatctatatggtttgtcgtgtatcaaaaag
tggttgaaacaaaaaggaaggttaggaaagtgcccccaatgtaataagaaatgcacagtg
aagggtattcgagtactttatgcttctcgacttcatgctgttgatgaagaacttcaaaag
aaaattaggtctcttgaagccagttgtttttctcttgaaaaagagtgcactgattggtgt
aagaaagaacttgagtggaggaggagagaagttgagttacataagcaagtggagcacctc
aaagagagaacaactgagggttcgacaactgaaatgcaaagcaggtcatctgtacgcatt
tttggatgcaatatcaacggcaaatctgaaaaacgtgaatatgcgaatagttttcttttg
cagaaagagattcagattgatggtgctcgcctatttgatgtggacatcaatggtgagaat
ttgatgattgccagaaggctctctggaatgggaggacagcatatgcttaccaaagtcagt
ctattgcctccgcatgaaagagaagacattctgcttcctgcgagcatgaaaaccatcaag
gacttgcatgtttctcctcatgatagagtcatactcttggcttctttagggaagaagttg
tcaattcttagttctgaaaacaaccatactgttctgacatacgacttaccgactgttcct
tggtcatgtgcgtgggatgctaacaattcgcagtacatgtatgccggtttacagaatggc
atggttttgcagtttgatcggcgtcaaactacaaggccagtggaatctatgacggggttg
acaggaaatcctgttcatactgtgcattcccttacatctcctacacttggtgatggcgtt
agaagtgttctttctgcatcttcagtaggcttgtgccactggaactttgatagtggtgac
gaaaggccgtgcttggtccctgagtcagagaatcaaggaatctgtatatctctcgcttgt
ggagatagaaatgatgacatagttgcctctttccgtcctaaactggagatctctggtgac
atggctgcttctcaagtattgcccactccagtttctacaatggagcaagcagtatacggc
tctcatgttctttacaggagagttggcagcagataccagaagttaggagtttcttgtgcc
aaagttagtgccatccgacttccaaaaactgctataattgatagagggaagaagaacccc
atgtttgcctctggtgatgacgcaacaatggaactggtcttacaagaattgccatcttta
aatgtggctcagcgtattaaatctctgaacggcccagttcgcgatgttaggtatgcacgc
ctccaaaattcggtattgctgggttgtttgagtgaggataaactgctgctttgctcacat
aaacttcaatga
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