Solanum stenotomum: 125870474
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Entry
125870474 CDS
T08385
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00900
Terpenoid backbone biosynthesis
sstn01100
Metabolic pathways
sstn01110
Biosynthesis of secondary metabolites
Module
sstn_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125870474
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sstn01006
]
125870474
Enzymes [BR:
sstn01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125870474
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125870474
2.5.1.29 geranylgeranyl diphosphate synthase
125870474
Prenyltransferases [BR:
sstn01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125870474
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
125870474
NCBI-ProteinID:
XP_049406867
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All DBs
Position
7:complement(53758017..53761724)
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AA seq
334 aa
AA seq
DB search
MVFSMVMSCSPSLFLPRSRMVMQKTIRCSSSVSTASESIKFDLKTYWTTLISDINQKLDE
AVPVKYPNQIYEAMRYSVLAKGTKRSPPIMCVAACELFGGNRLAAFPTACALEMVHAASL
IHDDLPCMDDDTTRRGLPANHTVFGVDMAILAGDALFPLGFQHIVSHTPSDLVPEDRVLR
VITEIARAVGSTGMAAGQFLDLEGGPNAIDFVQEKKYGEMGECSAVCGALLAGASDEEIQ
HMRKYGRAVGVLYRVVDDILDAKKTEDKTEGKKKKGKSYVSVYGIEKAVKVAEDLRAQAK
RELDGLEKYGDKVMPLYSFLDYAADRGFSIEDQV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggttttctctatggtgatgagctgttcacctagtttatttcttccaaggagccgcatg
gttatgcagaaaacaatccggtgctcttcttctgtttcgacagcgtctgagtccatcaag
tttgatcttaagacctattggacaactctaattagtgatatcaaccagaaacttgatgag
gcggttccagttaagtacccaaatcagatttatgaggcaatgcgctactctgtcctagcc
aagggtaccaaaaggtccccacccatcatgtgtgtcgcagcttgtgagcttttcggtgga
aatcggcttgctgcctttcccactgcctgtgccttagagatggttcatgctgcttcattg
attcatgatgatttgccctgcatggatgatgacacaactcgacgaggtctgcctgcaaat
cacacagttttcggtgtagatatggcaattttagccggagatgccttgttccctcttggt
ttccagcatattgtgtcccatactccaagtgatctagttcccgaggatcgagtcctcagg
gtcattacagagattgctcgagctgtggggtccactggcatggctgctggccagttcctt
gaccttgagggtggaccaaatgctattgattttgttcaagagaagaaatatggtgaaatg
ggtgagtgctctgccgtttgtggagctctcttggctggtgcttcagatgaggagatccaa
cacatgagaaaatatggtcgagctgttggtgtcttatatcgggttgttgacgatatattg
gacgcaaagaagacagaggacaaaaccgaggggaagaaaaagaaaggcaaaagctatgtc
agcgtttatggcattgagaaggctgtgaaagttgctgaggatcttagagcgcaggctaag
agagagttagatggtctcgagaaatacggcgataaagtcatgccactttacagttttctt
gattatgctgcagatagaggttttagcattgaagaccaagtctag
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