Solanum stenotomum: 125870503
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Entry
125870503 CDS
T08385
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
sstn
Solanum stenotomum
Pathway
sstn04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
125870503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sstn04121
]
125870503
Ubiquitin system [BR:
sstn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125870503
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
F-box
LRR_NXF1-5
LRR_At1g61320_AtMIF1
LRR_8
Motif
Other DBs
NCBI-GeneID:
125870503
NCBI-ProteinID:
XP_049406906
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Position
7:complement(1641529..1645469)
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AA seq
581 aa
AA seq
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MAYAFPEEVLEHVFSFLTSDKDRNAVSLVCKSWYEIERWCRKRIFVGNCYAVSPRIMIRR
FPEVRSVELKGKPHFADFNLVPEGWGAYVYPWILAMSKSYTWLEEIKLKRMVITDESLEL
ISKSFKNFKVLVLSSCDGFTTDGLAAIAANCRNLRKLDLGESEVEDLSGHWLSHFPDNCT
SLVSLNIACLASEVSLLALERLVTRSPNLRTLRINRAVPLERLPNLLRRTSQLVEFGTGV
FSADVRSDFFSNLTEAFSSCKQLKCLSGFWDVVPAYLPALYPVCSRLTSLNLSYATCQNP
ELGKLISQCHNLQRLWVLDYIEDTGLEELAANCKDLQELRVFPSDPFAAEPNTTLTEQGL
VAVSDGCPKLQSVLYFCRQMTNAALVTIARNRPNMIRFRLCIIEPRTPDYLTLGSFDAGF
GAIVENCKELRRLSLSGLLTDRVFEYIGAHAKKLEMLSIAFAGDSDLGLHHVLSGCDSLR
KLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSFEACKMLAQKMPRLNVEVIDERGPP
DTRPESCPVEKLYIYRTVAGRRFDTPGYVWTMDEDAAVRLT
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacgcattcccggaggaagtactagaacacgtcttctccttcctcacctccgac
aaggaccgtaacgcagtatcactagtctgcaaatcatggtacgagatcgaacggtggtgt
aggaagagaatattcgttggaaactgctatgctgttagccctaggatcatgatccgacgg
tttccggaagtcagatctgttgagcttaaagggaagcctcattttgctgactttaatctt
gtaccggaaggttggggagcttatgtgtatccttggattttggctatgtctaaatcttat
acatggcttgaagaaattaagcttaagaggatggtaattactgatgagtcgttggagttg
atttctaagtcgtttaagaactttaaagtgttggttttgtcttcatgtgatgggtttact
actgatggacttgctgctattgctgctaactgcaggaatctgagaaaactagacttgggg
gagagtgaagtggaggaccttagtgggcattggttaagccatttccctgataactgtacg
tcacttgtatcacttaacattgcctgtttggcttctgaggtcagtctgttagctttggag
cgcctggttactcgctctcctaatttgagaactcttcggataaatcgtgctgtgcccctt
gagaggcttccaaacttgctccgccgcacttcccagttggtcgaatttggtacaggtgtt
ttctctgctgatgtgcgatctgattttttctcaaacctgacagaagctttttcgagctgc
aagcaacttaaatgcctgtctgggttttgggatgttgtaccagcttaccttccagcttta
tatccagtgtgctcaagactcacctccttgaatttgagctatgctacctgtcagaaccct
gagcttggcaagctcataagtcagtgtcacaatttgcagcgtttgtgggtgctagactac
atcgaagatactggtcttgaggaacttgctgccaattgtaaggaccttcaagagctgcgg
gtgtttccttctgacccatttgctgcagaaccaaatacaaccttgacggagcaaggcctt
gtagctgtctcagatggctgcccaaagctccagtctgttttatacttctgccgccaaatg
actaatgcagctttagttactattgctaggaatcgacctaacatgatccgttttcgcttg
tgtatcattgagcctcgaactcctgattatttaacccttggttcatttgatgctggtttt
ggggccatagtagagaactgtaaggaattgcggcgactttcactttctggcctccttact
gatcgtgtctttgaatacattggcgcccatgctaaaaagttggagatgctttccatagct
tttgctggtgatagcgatttgggactccaccatgttctctcaggttgtgatagccttcgg
aagttggagatcagagattgtccgtttggagacaaggctcttttggctaatgctgcaaag
ctcgagacaatgcgatccctttggatgtcttcttgttcagtaagttttgaagcatgtaag
atgctagctcagaagatgcctaggcttaatgtggaagtcatagatgagaggggtcctcca
gatacaaggccagaaagctgtcctgtggagaaactttacatatatcgaactgtggctgga
cgaagatttgacacacctggttatgtttggacaatggatgaagatgcagctgtaaggttg
acctga
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