Solanum stenotomum: 125870617
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Entry
125870617 CDS
T08385
Name
(RefSeq) retinoblastoma-related protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125870617
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
125870617
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
Motif
Other DBs
NCBI-GeneID:
125870617
NCBI-ProteinID:
XP_049407043
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All DBs
Position
7:59647442..59654127
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AA seq
1018 aa
AA seq
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MNMEELKNYSNSEENGSVDSLEVRFTDFCKNGLSMGESFMVEARKLFMDSKHLLLSNNAA
IGAITPEEVERYWFAFVLFSVKRLSENEARNSSNANEGNGFDLCQILRGAKLNVLDFFKE
LPQFIVKVGPVLSNLYGSDWEKRLQAKELQTNFVHLSLLSKYYKRAYQELFLSSDNNEDK
QSATSNSIILLPQYYRFGWLLFLSLREHVFSRFKDLVTCTNGLVSVLAILIIHVPVRFRN
FNINDSPRFVKKGDKVDLLVSLSSIYQTSIDDLRETMDKVNNLITVKLKKEPCLASECRA
ENLDNIDADGLTYFENLLEESSLSSSICILEKDYNDAIQNKGELDERIFVNDEDSLLGSG
SLSGGAVNMNGIKKKFDAMASPTKTITSPLSPYRSPGASNVNNNPNCGNSKMAATPVTTA
MTTARWLRTVIAPLQPKPSLELERFLSACDRNVSADVIRRAHIILEAIFPSSGPGEHCAA
GSLQSTSLMDNIWAEQRRSESLKLYYRVLQTMCVAESQILHATNLTSLLTNERFHRCMLA
CSAELVLATHKTVTMLFPAVLERTGITSFDLSKVIESFIRHEESLPRELRRHLNSLEERL
LESMVWEKGSSMYNSLTVAKPSLSAEINRLGLLAEPMPSLDAVAMHINLSSGNLPPVPPL
QKSDLAPNGHICDIRSPKRLCTEYRSVLVERNSFTSPVKDRFLALTNIKSKFPPPLQSAF
ASPTRPNPGGGGETCAETSINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKIL
NQRTSLFFSRHIDQIILCSFYGVAKISQLNLTFKEIIYNYRKQPQCKPQVFRSVFVDWTS
ARHNGKTGSEHVDIITFYNEMFIPSVKPLLVELAPAGNEQKNNHVEKTKNDGQGPASPRP
SSFPSLPDMSPKKVSAVHNVFVSPLRSSKMDALISHSSKSYYACVGESTHAYQSPSKDLT
VINNRLNGNRKLRGALNFDDVDAVGLVSDSIVANTLYLQNGNCISSPRAAVKTEQPES
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggaggagctgaagaattattcgaattctgaagagaatggttctgtggactct
cttgaagttcgatttactgatttctgcaagaatgggttgtcgatgggtgagagttttatg
gtagaagcaagaaagctgtttatggacagtaaacatcttttactgtcgaataatgctgct
attggagctataacgccggaggaagttgaacggtattggttcgcatttgttctgttctcg
gtgaagagattaagtgagaatgaagcgaggaattcgagtaatgcgaatgaaggaaatgga
tttgatctatgccaaattctgcgaggggcgaaactcaatgttctagacttcttcaaagaa
ttacctcagtttattgttaaagttggtccagtattaagcaacctatatggttcagattgg
gagaagagacttcaggcaaaggaattgcagaccaactttgtgcatttgagccttttaagc
aagtactacaagcgcgcatatcaggagctgtttctgtcaagtgataacaatgaagacaag
cagtctgcaacttctaattcgattatcctcttgccacaatattatcgttttggctggttg
ctttttctttcacttcgcgaacatgtatttagccgcttcaaggatcttgtgacatgcaca
aatggtttagtttctgtgctggcaatcttaataatacatgtgcctgtccgcttcagaaat
ttcaacatcaatgactccccgcgatttgttaagaaaggagacaaagtggacttgcttgtt
tcattaagtagcatttatcagacctcgatagatgacttaagggagaccatggacaaagtt
aataatctaataacagtaaagttgaagaaggaaccttgtttggcttcagaatgcagggca
gagaacctggacaacatcgacgcagatggtttgacctattttgaaaatttactggaggaa
tcatctttatcgtcaagtatatgtatactggagaaggattacaatgatgcaattcagaac
aagggtgaattggatgagaggatttttgtcaatgacgaggatagcttgctggggtcaggg
agcttgtctggaggtgcagtcaatatgaacggaatcaagaagaaatttgacgcaatggct
tccccaacaaagacaattacaagcccactctctccttaccgttctcctggtgcatccaat
gttaataacaacccaaattgtggtaactcaaagatggcagctacccctgtaaccacagca
atgacaactgccaggtggctgcgtaccgtcatagctccactacagccaaaaccttcactt
gagctggagagatttttgtccgcctgtgataggaatgtatcagctgatgtgatccggagg
gctcacattattctggaggctatatttccaagtagtggtcctggggagcattgtgcagct
ggtagcctgcaaagcacgagcttaatggacaacatatgggcagagcaacgtagatctgag
tctttgaagttgtattatagggttctgcagactatgtgtgttgcagaatcccagattttg
catgcgaccaatttaacttcgttgctaaccaatgagaggtttcatagatgtatgcttgcc
tgctcagctgaactagttcttgccactcacaagacagttactatgttgtttccagctgtt
ttggagagaacaggaattacatcttttgatctcagtaaggtgatagagagcttcatcagg
catgaagaaagtcttcctcgagaactgagacgccatttgaattcacttgaagaacgactc
ttggagagcatggtttgggagaagggctcttctatgtacaactctttgactgttgcaaaa
ccatcactttctgctgaaattaatcgcctgggcctgttggctgaaccgatgccatccttg
gatgctgttgcaatgcacattaacctatcttccggaaatttaccaccagtgccgccttta
cagaagagcgacttggcccctaatggtcatatctgtgatatccggtcaccgaagagattg
tgtactgaatatcgtagtgtgttggttgagcgaaattccttcacatcacctgtgaaggat
cgttttctggctctcaccaatataaagtcaaagtttcctccacctttgcagtctgcgttc
gcaagtccaacaagaccaaaccctggtggtggaggggaaacatgtgctgagacatcaatc
aatgtattctttggcaagattgtgaagttggctgctgtcagaatcaatggcatgatagag
cggctacagctttctcaacaaataagagagactgtatattgcctttttcagaagattctc
aatcagaggacaagtcttttcttcagcagacatattgaccagatcatcctttgctctttc
tatggagttgccaagatttcacaacttaacttgaccttcaaagaaattatatacaactac
cggaagcaacctcagtgcaaaccacaagtttttcgaagtgtttttgttgactggacatca
gcgcgtcacaatgggaaaacaggttcagaacatgttgatatcatcacgttctacaatgaa
atgtttattccttctgttaagccattattagtcgagcttgcacctgctggaaatgaacaa
aagaacaaccatgttgaaaaaaccaagaatgacggtcaaggtccagcatcccccagacca
tcttcatttcccagtctccctgacatgtctccaaagaaagtatctgctgttcataatgtt
tttgtctccccgctgcgatcatctaagatggatgccttgatttcccatagctctaaaagc
tattatgcttgtgtgggagaaagcactcatgcttatcagagcccttcaaaagatttgaca
gtaatcaacaaccgcttgaatggcaatcggaagctcagaggcgctctcaattttgatgat
gttgatgctgtgggcttggttagtgattctatagttgccaacaccctttaccttcaaaac
gggaactgcatatcatcacctcgtgcagctgtgaagactgagcagcccgagtcctaa
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