Solanum stenotomum: 125870838
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Entry
125870838 CDS
T08385
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z33-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
sstn
Solanum stenotomum
Pathway
sstn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125870838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125870838
Spliceosome [BR:
sstn03041
]
Common components
Common spliceosomal components
SR proteins
125870838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
zf-CCHC_3
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125870838
NCBI-ProteinID:
XP_049407336
LinkDB
All DBs
Position
7:50883603..50889194
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AA seq
315 aa
AA seq
DB search
MPRYDDRMGNSTRLYVGHLSSRTRSRDLERAFSKYGRVRDVDMKHDYAFVEFSDPRDADD
ARYYLDGRDIDGRRIIVEFAKGVPRGPGGSREYLGKGPAPGSGRCFNCGLEGHWARDCKA
GDWKNKCYRCGERGHIERKCPNSPKKVSRRSYSRSPVRSKSRSRSRSPRRSYSRSRSYSQ
SRSPPPKREQVDQVKRSRSYSRSPEPRKASPSPPPKTRKRSPTPEEGSPMEAKSPPSPMR
EEGAYSQSPRERSVSPSSPRRDSPAPRKYDDDSPAEANGGSRSPSPKYRRNHADEDDEDE
GEFRNQRSGRESQSP
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgttatgatgatcggatgggaaatagcactcgtctctatgtgggacacttgtct
tcacggacccgttcacgtgatctggagcgtgcgttcagtaaatatgggagagtacgggat
gtggacatgaagcacgactatgccttcgtagaatttagtgatcctcgagatgctgatgat
gcaagatactatttagatggccgtgacattgatggacgccgcataattgttgaatttgcc
aagggagtgccacgtggaccaggcggttcgcgcgagtatcttggcaaaggacccgctcct
gggtcaggccgctgcttcaactgtggccttgaaggtcactgggctcgagattgcaaagct
ggggattggaagaacaagtgttatcgatgtggagaaagaggtcacatagaaaggaaatgc
ccaaatagtcctaaaaaagtcagtagacgcagctactcacggtcgcctgttaggtcaaag
tcacgctcacgttcacgttctcctcgtcgaagttatagcagaagtcgcagctatagtcaa
tcaagatccccgccaccaaagagagaacaagtggaccaggtcaagcgatcaagaagctac
agtaggagcccggagccaaggaaggctagtccaagccctccacccaagactaggaagcgc
agcccaacacctgaagagggaagcccgatggaagcaaagagccctccttcaccaatgaga
gaagaaggtgcctatagccaaagccccagagagagaagcgtgagtccttcaagtcctaga
agggatagcccagctcctcgaaagtatgatgatgacagccctgctgaagctaatggtgga
agtcgaagcccgagtcccaagtaccggaggaaccatgcagatgaagatgatgaggatgaa
ggtgagtttcgtaatcaacgctccggtagagagagccaatcaccttga
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integrated database retrieval system
