Solanum stenotomum: 125870866
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Entry
125870866 CDS
T08385
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sstn03041
]
125870866
Spliceosome [BR:
sstn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125870866
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_occluded
GHMP_kinases_C
Motif
Other DBs
NCBI-GeneID:
125870866
NCBI-ProteinID:
XP_049407374
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Position
7:1959130..1967102
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AA seq
432 aa
AA seq
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MAELQREEEQQNEESVKLFVGQVPKNMTESQLVEMFQEFAIIVDEVNIIKDKTTRASRGC
CFVICPSREEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSDPE
VSALFSQYGVIKDLQILRGSQQTSKGCAFLKYEKKEQAVAAIDALHGKHKMEGATVPLVV
KWADTEKERQARRAQKSLSHASDSRQHPSLFGALPMGYMPPYNGYGYQTPGAYGLMQYRL
PSMQNQSAFQNIVPPINQASALRGGAPDLSPGISPRNYAMSPGSYGSAYPAVPGIQYSMP
YPGGVMNTRPPSGSPGSIPPSTTNSHSAASSSVSSSTGGQVEGPPGANLFIYHIPQEFGD
QELANAFQPFGRVVSAKVFVDKATGVSKCFGFVSYDSTAAAQTAISMMNGCQLGSKKLKV
QLKRDNKQNKHY
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcggagttgcagagggaggaggagcagcagaacgaagagagcgtgaagttgtttgta
ggtcaagtaccgaagaacatgacggaatcacaacttgtcgaaatgttccaagagtttgct
attattgttgatgaagtcaacatcatcaaagataaaactacgcgtgcttctcgaggctgt
tgttttgtgatctgtccatctagagaagaagcggataaggcagttaatgcatgccacaac
aaaaagacgcttcccggggcttctagtccgttgcaagtaaagtatgctgatggcgagttg
gaaagactagagcacaagctttttgttggtatgcttccaaagaatgtctccgatcctgaa
gtatctgccttgttctctcaatatggagtcattaaagatttgcagattctcagaggttct
cagcaaactagtaaaggatgtgcttttctgaagtatgagaaaaaagaacaagcagttgca
gcaatagatgccctccatggaaagcataagatggagggtgctactgtccctttggtagtc
aaatgggcagatactgaaaaggaaaggcaagcccggagggctcagaaatctctatctcat
gcttccgactctagacagcatccctctttgtttggagccctacctatgggttacatgcca
ccatacaatggctatggttatcagactcctggggcatatgggctcatgcagtatcgccta
ccatcaatgcagaatcagtctgcatttcagaatatagtcccaccaataaaccaagcaagt
gctctgcgtggaggtgcacctgatctttcacctggaattagcccaagaaattatgccatg
tcacctggaagttatggatccgcttaccctgctgttccagggattcagtattcaatgcca
tatcctggaggtgttatgaataccagaccaccaagtggttctcctggttcaattccccct
agtacgaccaacagtcattctgcagcatcttcaagtgtcagttcaagtacagggggtcag
gttgaaggtccacctggtgctaatctatttatttaccatattcctcaagaatttggtgat
caagagcttgcaaatgcatttcagccttttggtagggttgtgagtgccaaggttttcgtt
gacaaagcaactggtgttagcaaatgttttggatttgtaagttatgactctacagcagct
gcacaaactgcaatcagtatgatgaatggttgccaattaggtagtaagaagttgaaggtt
cagcttaaaagggacaacaaacagaataaacattattga
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