Solanum stenotomum: 125870941
Help
Entry
125870941 CDS
T08385
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00061
Fatty acid biosynthesis
sstn00071
Fatty acid degradation
sstn01100
Metabolic pathways
sstn01212
Fatty acid metabolism
sstn04146
Peroxisome
Module
sstn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125870941
00071 Fatty acid degradation
125870941
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125870941
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sstn01004
]
125870941
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125870941
Enzymes [BR:
sstn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125870941
Lipid biosynthesis proteins [BR:
sstn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125870941
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125870941
Exosomal proteins of breast cancer cells
125870941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
ATP-grasp_6
Motif
Other DBs
NCBI-GeneID:
125870941
NCBI-ProteinID:
XP_049407447
LinkDB
All DBs
Position
7:complement(451810..456335)
Genome browser
AA seq
409 aa
AA seq
DB search
MSIGITLYSSDIYISYLPLAHIYERATQVLLVYFGGASGFYQGDNLKLVDDIAVLRPTVF
CSVPRLYNRLYAGIMNAVKTSGSLRERIFNSAYNAKKQAIFNGKNPSPIWDRLVFNKIKA
RLGGRVRLMVSGASPLSPDVMDFMRICFGCQVIEGYGMTETSGLISNMDQSDILSGHVGS
PNPACEIKLVDVPEMNYTYEDQPYPCGEICVRGPIVFQGYYKDEVQTQEVIDKDGWFHTG
DIGAWLPGVRLKIIDRKKNILKLAQGEYVAPEKIENVYANSKYVAQCFIHGDSLNSSLVA
IVCVDPDMLKTWAINEGIKNKDVKQLCTDPRAKAAILKDMDTVGKEAQLRGFEFAKAITL
VLEPFTMENDLLTPTYKIKRPQARIYFAKEIANMYAELSESNSSPNKIL
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcggcatcacactgtactcttcagatatttacatctcatatcttccgctggca
catatatatgagagggctacccaagtattgctggtctattttggaggagcttctggattc
tatcagggagataatctgaaactagtggatgatatagctgtattaaggcccactgtcttt
tgcagcgtccctcggttatacaatagattatatgccggcattatgaatgctgtgaagaca
tctggctcactcagagagaggatatttaattctgcttataatgctaagaagcaagcaatt
tttaacggaaagaatccatccccaatctgggatagattggtattcaacaaaataaaagca
aggctaggaggaagagttcgtttgatggtctcaggagcttcaccattatctccggatgtt
atggactttatgcgtatatgctttggttgtcaagttatagaaggatatggaatgactgaa
acttctggtcttataagtaacatggatcagagtgatatcttatctggtcatgtgggctct
cctaatcctgcatgtgaaataaagcttgttgatgtccctgaaatgaactatacatatgaa
gatcagccttatccctgtggtgagatttgtgtaagaggccccatagtgttccagggatac
tacaaggatgaagtacagacgcaagaagtgattgacaaagatggatggtttcacaccgga
gatattggagcgtggctacctggggtccgcttaaagataattgataggaagaagaatatt
ttaaagttggcacagggagaatatgtagctccagaaaaaattgagaatgtttatgcaaat
agcaagtatgttgcacagtgctttatacatggtgacagcctgaattcctctctggtagcc
atagtctgtgtggacccagacatgttgaaaacatgggcaataaatgaaggcatcaagaat
aaagacgtgaaacagctctgcactgatccaagagcgaaagctgcaatattgaaagacatg
gatactgttggaaaggaagcacagttgagaggtttcgaatttgcaaaagctatcactttg
gtgcttgagccttttacaatggagaatgatctgcttactccgacttacaagataaaaagg
ccacaagcaagaatatactttgctaaagaaatagcaaatatgtatgcagaactctcagaa
tccaattcctctccaaataaaatcttgtga
DBGET
integrated database retrieval system
