Solanum stenotomum: 125870943
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Entry
125870943 CDS
T08385
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sstn
Solanum stenotomum
Pathway
sstn00061
Fatty acid biosynthesis
sstn00071
Fatty acid degradation
sstn01100
Metabolic pathways
sstn01212
Fatty acid metabolism
sstn04146
Peroxisome
Module
sstn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
125870943
00071 Fatty acid degradation
125870943
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
125870943
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sstn01004
]
125870943
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125870943
Enzymes [BR:
sstn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
125870943
Lipid biosynthesis proteins [BR:
sstn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
125870943
Exosome [BR:
sstn04147
]
Exosomal proteins
Exosomal proteins of breast milk
125870943
Exosomal proteins of breast cancer cells
125870943
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
125870943
NCBI-ProteinID:
XP_049407448
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Position
7:complement(436721..447503)
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AA seq
700 aa
AA seq
DB search
MDSEAERRFRTIRNHLTSTAAAAVEQEQPSLLCRRNAAGEFFFEQGFSNALPEELKTGKW
NVYRSARSPVKLISRFADHPEIGTLHDNFVRSVEAFPDCNYLGSRVQEDGTVGEYKWMTY
KEADTARSAIGSALVCHQIPKGSCVGLYFINRPEWLIVDHACSAYSFISVPLYDTLGPEA
VKYIANHAAIEAIFCVPETLNHLLSFVSEIPSLHLIVVVGAVDGRIPSLPPSSGVEIISY
STLLSQGLSNLQPFCPPKPETVATICYTSGTTGTPKGAVLTHGNLIANVAGMSIGINLYS
SDIYISYLPLAHIFERATQVLLVYFGGASGFYQGDNLKLVDDMAVLRPTVFCSVPRLYNK
LYASIMNVVKTSGSLREKIFNAAYNAKKQAIFNGKNPSPFWDRLVFNKIKSRLGGRVRYM
VSGASPLSPDVMDFLRVCFGCQVIEGYGMTETSCTISNMDQSDILSGHVGSPNPACEIKL
VDVPEMNYTYEDQPYPRGEICVRGPIVFQGYYKDEVQTQEMIDKDGWLHTGDIGVWLPGG
RLKIIDRKKNIFKLAQGEYVAPEKIENVYAKSKYVAQCFIHGDSLNSSLVAIVCVDPDMF
KAWAINEGIKNKDVKQLCTDPRAKAAILKDMDTVGREAQLRGFEFAKAITLVLEPFTLEN
NLLTPTYKIKRPQARTYFAKEIADMYAELSTSNSSPDKIL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggattccgaagctgaacgtcgttttcgaactattcgcaaccacctcacttccaccgcc
gccgccgccgttgaacaagagcagccgtcacttctctgccgtagaaatgccgccggcgag
ttcttcttcgagcaaggatttagtaatgcgctccctgaggaactgaagacaggaaaatgg
aatgtgtacagatctgctcgctctccggtgaagcttattagtagatttgcagatcatcct
gaaattggtaccttgcatgacaattttgtgcgatcggttgaggcgtttccagactgcaat
tacttaggatcacgagttcaagaagatggaacagtaggagagtacaaatggatgacatac
aaggaggcagatactgcacggtcagcaataggttctgcactagtttgtcatcagattcca
aagggatcttgtgttggtttatattttatcaaccgaccagaatggctgatagtcgaccat
gcctgctctgcgtattcatttatttctgttcctttatacgatactcttggtccagaagct
gtaaaatatattgcaaaccatgcagcaattgaagctatattttgtgtgccagaaacatta
aatcatttgcttagcttcgtatcggagattccttcgctgcatttaattgtggtagttgga
gcagtagatgggagaattccatcacttccaccgtcatctggagtggagatcatatcatat
tcaacactacttagtcagggtctcagcaatcttcagcccttttgcccaccaaaacctgag
actgttgctacgatatgctatacgagtggtacaactgggaccccaaagggtgctgttttg
acccatggaaacctgattgcaaatgttgctggtatgagtattggcatcaatctatactct
tcagatatttacatctcatatcttccgctggcacatatatttgagagggctacccaagta
ttgctggtctattttggaggagcttctggattctatcagggagataatctgaaactagtg
gatgatatggctgtattaaggcccaccgtcttttgcagcgttcctcggttatacaataaa
ttatatgccagcattatgaatgttgtgaagacatctggttctctgagagagaaaatattt
aatgctgcttataatgctaagaagcaagcaatttttaatggaaagaatccatccccattt
tgggatagattggtattcaacaaaataaaatcaaggctaggaggaagagttcgctatatg
gtctcaggagcttcaccattatctcctgatgtaatggactttttgcgggtatgctttggt
tgtcaagttatagaagggtatggaatgaccgaaacttcctgtactataagtaacatggat
cagagtgatatcttatctggtcatgtgggctctcctaatcctgcatgtgaaataaagctt
gttgatgtccctgaaatgaactatacatatgaagatcagccttatccccgtggtgagatt
tgtgtaagaggcccgatagtgttccagggatactacaaggatgaagtacagacgcaagaa
atgattgacaaagatggatggcttcacaccggagatattggagtgtggctacctgggggg
cgcttaaagataattgataggaagaaaaatattttcaagttggcacagggagaatatgta
gctccggaaaaaatcgagaatgtttatgcaaagagcaagtatgttgcacagtgctttata
catggtgacagcctaaattcctctctggtagccatagtctgcgtggacccagacatgttt
aaagcatgggctataaatgaaggcatcaagaataaagacgtgaaacagctctgcactgat
ccaagagcaaaggctgcaatattgaaagacatggataccgttggaagggaagcacagttg
cgaggtttcgaatttgcaaaagctattactttggtgcttgagccttttactttggagaat
aatctgcttactccaacgtacaagataaaaaggccacaagcaagaacatactttgctaaa
gaaatagctgacatgtatgcagaactctcaacatccaattcttctccagataaaatcttg
tga
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