Solanum stenotomum: 125871041
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Entry
125871041 CDS
T08385
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125871041
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sstn04040
]
125871041
Membrane trafficking [BR:
sstn04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
125871041
Ion channels [BR:
sstn04040
]
Other channels
Mechanosensitive channel (Piezo)
125871041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
125871041
NCBI-ProteinID:
XP_049407582
LinkDB
All DBs
Position
7:complement(2261408..2581731)
Genome browser
AA seq
2473 aa
AA seq
DB search
MGSFLYGFVLPFLLLSAGLLNWSLISLVNLVSSLLLRFTAPKRGFHFKGRVLLWFVFLFS
VLAILLEVVFLIVWAILGPEWELADAWWMKLIGLMKLKSWRSPLVIYLLVLQLLAAGVAL
FEINGNRFRLGQLQDPRWEHFLSVLEHIGARLRVSSCLFLPAVQLIVGISYPSWLSLPFF
ICSCVGLVDLSLTSNFLGLFRGWKLLWLYSGFNLSLLYFYQLRIPFPQMFYVVSDYIGLY
KISAHSDWQKNCSGLSLLAYYYLISFIEGDLEEMYLIMTMREGNLTERLLPSRHSFFVRE
YRSGVRHTNVLLKRTVFRIFTINFFTYGFPVSLFALSFWSFHFASVCAFGLLAYVGYILY
AFPSLFRLHRLNGLLLVFILLWAVSTYIFNVAFVFLNWKLGKDMEIWEMVGLWRYPIPGF
FLLAQFFLGILVAVGNLVNNSVFLCLSDEENQSSNDSFSEEVKEETEVLIVATVAWGLRK
CSRAIMLVLIFIIATKPGFIHAVYMIFFFVYLLSHDINEKMRQSLILLCEAHFAVLYILH
LNLISQTLEHKSSWSMAVLSQLGLLQSDSYYDFLEIAVLACFCAVHNHGFDTLFSFSAIV
QHTPCPPVGFSILKAGLNKSVLLSVYASSTNRDHNSDHSHEKRIASYLSAIGQRFLSVYR
SFGTYIAFVTILITVYLVTPNYVSFGYIFLLLFWIIGRQLVEKTKRRLWYPLKLYAISVF
VLIYSLSIFPTFEAWMSKSLDIQVYLGYHHGASLFENVWQSLAIVIVMQMYSYERRQSKF
IHSEDPGPSQFGIFGFIRRFLIWHSQKILFIALFYASLSPISAFGLFYLLGLVLCSTLPK
ASRIPSKLFLIYTGFIVAIEYLFQMWGKQAGMFPGQKHYALSVILGLEVYRPSFWGLEAG
LRAKVLVVAACTLQYNVFHWLEKMPTSLLNDNRSEEPCPLFVSEEDVMPLVPDGENKPVA
DSNEFSTQGMRTSSKSCPYFDQSLYQSSDGVSSSRGVSEYRSRSKYSFGSIWGSRKESHK
WNKKLVVSLRKERLEMQKTTLKIYLKFWVENMFNLFGLEINMLALLLTSFALLNAVSLLY
IALLASCVLLERRIIRKVWPIFVLLFTLILLLEYFAMWKSLMPLNQHRPNQTVHCHDCWS
RSDAYFDYCKKCWLGFTVDDPRILISYYVVFMLACFKLRADRTSSLSGSFTYRQMVSQRK
NSFVWRDLSFETKSMWTFLDYLRLYCYCHLLDLVLALILITGTLEYDVLHLGYLGFALIF
FRMRLTILKKKNEIFKYLRIYNFTVIVLSLAYQSPFIGDFNAGKCETVDYIYEVIGFYKY
DYGFRITSRSALVEIIIFVLVSLQSYMFSSPEFEYVFRYLEAEQIGAVVREQEKKAAWKT
AQLQYIRESEEKKRQRNLQVEKMKSEMLNLQIQLHSTDTISAATRGDTSPPSEGLRRRKN
FSAPNLEERKPDKLEMNVNSDSLFTHDFPESPNSTREESPLAAELMKHPIETSLCEISEV
EEDAGDNALNLDKNNKRKGQSKDNPLVSAVQLFGDGVSQVQSIGNQAVSNIVSFLNIPPD
DSDSNETSTAGGGISYEREGENTPYTHLDRSSSLQSDRSRTSEAASLQIGRIFYHIWSQM
RSNNDVVCYCGFLLVFLWNFSLLSMVYLAGLFLYALCVNTGPSYIFWVIMLIYTEIYILI
QYIYQIIIQHCGFSIQSTTLQELGFPTKRITSSFVISSLPLFLVYLFTLIQSTITAKDGE
WFSLGYSTWKSRLLDPKEDLVASGWIEKARKLFLPFKNMVKMVIRGCCRYWKSLTQEAES
PPYFVQLSMDVHMWPEDGIQPERIESGINEILRLMHDDRCKNQNPSSCSCSSRVQIQSIE
KSSENPKIALAVFEVVYACPLTECPPEQFKSLTPAADIANEIRGAQTKGAVEEVGFPYPI
LSIIGGGRREVDLYAYIFGADLSVFFLVAIFYQSVKKNKSEFLDVSQLEDQFPKDYVFIL
MAIFFLIVLDRIIYLCSFATGKVIYYISNLVLFTYVVTEYAWNIDAQQSAAGLALRAIYL
TKAISLALQAIQIRYGVPHKSTLYRQFLTSKVSQINYLGYRLYRALPFLYELRCVLDWSC
TKTSLTMYDWLKLEDINASLYLVKCDAVLNRATHKPGEKQTKMTKFCNGICLFFILICVI
WAPMLMYSSGNPTNIANPVNDVRVQLDIKEKSGGRLTLYQTTLCEMIPFNQLHDDLNLDP
NGYLYAYNKNDIQLICCQPDANTLWLVPDVVQRRFILSLKDMEVKFSWVLTRDRPKDKEV
VKYERTLDPVDCPKPWEVKKVLNGSTNSFRAYNIYPRYIRVTGSGEVRTIEEEANGVSAD
IILNRGVSEWWSFNDINSQDVTGCGGLIGPMAIIVSEETPQGLLGETLSKFSIWGLYITF
VLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDIYAARAEGELVVEEILYWTLVKIY
RSPHMLLEYTKSD
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttttctttatggttttgtgctgccatttctgctcttatcagctggtttactg
aattggagtttgatttctcttgtcaatttggtgtcttctcttcttttgcgattcacggca
ccaaaaagaggattccatttcaaagggagagttctgttgtggtttgtttttctattttca
gttctcgctattcttctggaagtggtttttcttattgtatgggctattttgggtccggaa
tgggagttagctgatgcatggtggatgaaacttattggattgatgaaactgaagtcatgg
aggtcccccttagttatttatctcttggttctgcaactattagctgctggtgttgcttta
tttgaaatcaatggcaacagatttcgcttgggtcagctgcaagatccccgctgggagcat
ttcttatcggttctggaacatattggtgcccgtcttagagtgagttcttgcttatttctg
cctgctgttcagttgattgtgggaattagctatccttcttggctttctctaccctttttc
atttgtagctgtgtgggcctggttgatttatctttaacaagcaactttttaggtctattc
agggggtggaagctactctggctatattctggtttcaacctaagcctgctttatttttat
cagctccgtattccatttcctcagatgttctacgtagtatctgattatattggtctctac
aaaatatcagcgcactctgattggcaaaaaaattgttctggcctttctcttttggcatac
tattacttgatctctttcattgaaggtgatttggaggaaatgtatctcattatgaccatg
agagaaggaaacttgactgagcggcttctgccctcgaggcattccttttttgttcgtgaa
tacagatctggtgtgaggcatactaatgttttgttgaagaggacagttttccgaattttc
accatcaactttttcacgtacggcttcccggtctccttgtttgccctttctttttggagc
ttccattttgcaagtgtatgtgcgtttggactgctagcatatgttggctacattttgtat
gcttttccgtccttgtttcgtcttcatcgactgaatgggttgcttctagtcttcattctt
ttgtgggcagtcagcacatatatattcaatgtggcctttgttttcctcaactggaagctt
gggaaggacatggagatctgggagatggttggattgtggcgttatcctattcctggcttc
ttcttgcttgcacagtttttcctcggaatccttgttgcagttggcaatctcgtaaataac
tctgtttttctgtgcttgtcagatgaagagaaccaatcatcgaatgacagcttcagtgag
gaagtgaaagaagagaccgaagtattgattgtggcaacagttgcctggggattacgaaaa
tgttctcgggctattatgctagttctgatattcattattgcaacaaaacctggattcatc
catgctgtatatatgatattcttttttgtttatcttctgagccatgacatcaatgaaaag
atgcgccagtctctaatccttctatgcgaggctcattttgctgtcctgtatattcttcac
cttaatctaatctctcaaacattggagcataaaagctcatggagtatggcggtcctgtct
cagttaggtctactccaaagcgatagctattacgatttcctcgagatagcagtgcttgca
tgcttctgtgcagttcataaccatggctttgatacgttattctcgttttcagccattgtg
cagcatacaccttgtcctcctgtgggatttagcattttgaaagctgggttaaacaaatca
gtcctgttgtcagtttatgcctcttccaccaatagagaccacaattctgatcattcacat
gaaaagaggatagcttcatatctcagtgccatagggcagagatttttgtctgtatataga
tcatttggaacctatatagcttttgtgaccatccttatcacggtgtatctggtgacaccc
aactacgtgtcttttgggtacatcttccttcttctgttctggatcattggaagacaacta
gttgagaagacgaagaggcgcctatggtatccactaaagctctatgcaatttcagtgttt
gttctcatctatagtttgagcattttccccactttcgaggcctggatgtccaaaagcctt
gatattcaggtataccttggctatcaccatggagcatcactatttgaaaatgtatggcag
tctcttgcaatcgtaattgtgatgcaaatgtatagctatgagaggcgacaaagcaaattc
atccattcagaagatcctggtccatcacagtttgggatattcggtttcatcagacggttt
ctcatttggcacagtcaaaaaattttgttcatagctctgttttatgcatcattatctcca
ataagtgcatttgggcttttctatcttctgggtcttgtcctctgttcaaccctgccaaaa
gcttcccgaataccatccaagttgttcttgatttacactggatttatagtggcgatagaa
tatctgtttcagatgtggggtaaacaggctgggatgtttcctggacaaaagcattatgct
ttatctgttatcttgggcctcgaggtgtatagaccaagcttttggggtcttgaagcaggt
ttgagggctaaagtgcttgttgttgccgcatgtacacttcagtataatgttttccattgg
ttggaaaagatgccaacttctcttttgaatgacaatagatctgaggaaccttgtccattg
ttcgtctcagaagaagatgtaatgcctttagttcctgatggggaaaacaagccagtagca
gactccaatgaattttctacacaagggatgcgaacatcaagcaagtcatgcccgtatttc
gaccagagtctctatcaatcatctgatggtgtgtcctctagcagaggagtctccgagtat
agaagtagaagtaaatattcttttggttctatctggggaagcagaaaggagagtcataag
tggaataagaagcttgttgtatcactgagaaaagaaagacttgaaatgcagaagactacc
ttgaaaatttatttgaaattctgggtggagaatatgttcaacctctttgggcttgagatc
aatatgctcgcattgcttctcaccagctttgctttacttaatgccgtctccttgctctac
attgctttactagcttcttgtgttcttctggaacggcgaatcattcgtaaagtttggccg
atttttgtactattgttcactttgattcttttgcttgaatattttgccatgtggaagagc
ttgatgcctttaaatcagcaccgaccaaatcagacggtacattgtcatgattgctggagc
agatcggatgcgtactttgattattgtaaaaagtgttggcttgggtttactgttgatgac
cctcgaattctgatcagttattatgtggtcttcatgcttgcatgtttcaagctccgtgct
gatcgcacctccagtttatcagggtcctttacatatcgtcagatggtctcacagcgcaag
aattctttcgtgtggcgagatctttcatttgaaaccaaaagcatgtggacctttcttgac
tacttgaggctttactgctattgtcatcttctagaccttgtgcttgctttgatactgata
acgggtacccttgagtatgatgttctacatcttggatatcttggctttgctctgatcttc
ttccggatgaggcttacgattttgaaaaagaaaaatgagatattcaagtatcttcgcata
tacaattttactgtcatagttctctctctggcctatcagtctccatttattggtgatttt
aatgcgggaaaatgtgaaactgtagattacatttacgaagtgattggattttataaatat
gattatggctttcgcattacctcaagatcagctttggtcgagatcataatttttgtgctt
gtctcactgcaatcgtacatgttctcttccccagaattcgaatatgtgttccgttatctt
gaggcggaacaaattggtgctgttgtacgtgagcaagagaaaaaagctgcctggaaaact
gcacagttacagtacattcgtgagtctgaggagaagaaacgccagcgaaatttgcaagtg
gagaagatgaagtcggagatgctcaacttacaaatacagcttcacagtacagatacaatt
tctgctgccactcgtggtgacacttctcctcctagtgagggtttaaggaggaggaagaat
ttttcagctccgaatttagaggaaagaaaaccagataaactggagatgaatgttaattca
gactctctttttactcatgatttccctgaatctccaaacagtaccagggaagaaagccca
ttggcagcagaacttatgaagcacccaattgaaacttctttgtgtgaaataagtgaagtt
gaagaagatgcaggtgataatgctttaaacctggacaaaaacaacaaaagaaaaggacaa
tctaaggataatccgttagtttctgcggtacagttgtttggtgatggtgtttctcaagta
caatccattgggaatcaggctgtaagcaatattgtgagctttctaaacattccaccagat
gactctgattctaatgagacctcaactgctggaggtggaatatcttatgagagagagggt
gagaatactccgtacactcatctggaccgctcttcttctttgcaatctgataggagtaga
acgtctgaagcagcaagtttgcaaattgggagaatcttctatcacatctggtcccagatg
cgttcaaataatgatgttgtgtgctattgtggctttcttctcgtctttctttggaacttt
agtttgctttctatggtgtacctggcaggtctctttctgtatgcgctttgtgtgaacact
gggccaagttacattttctgggtcatcatgctaatctacacagaaatatacattttgatc
cagtatatttatcaaataattattcagcactgtggttttagcattcagtccactactctt
caagagctgggttttcctaccaaaaggataacatcatcttttgtcataagttcactgcca
ctatttctggtgtacttgtttaccctcatacagagcactataacagcaaaagatggtgaa
tggttttctctaggatacagtacttggaaaagtagacttttggacccaaaggaggaccta
gtggcatctgggtggattgagaaggcgaggaagctcttccttccattcaaaaatatggtg
aagatggtgatcagaggctgttgtaggtattggaaatcactaacgcaggaggcagaatct
ccaccatactttgtccagttgtccatggatgttcacatgtggccagaggatggaatccaa
ccagagaggattgaatctggaataaatgaaattctaaggcttatgcatgatgatagatgc
aaaaatcaaaaccccagcagttgttcttgttctagtagggtccaaattcaaagcatcgaa
aagagtagtgaaaatccaaaaatcgcattggctgtttttgaggtggtttatgcctgccca
ttgacagaatgtccacctgaacagttcaaatcactcactccagctgctgacatagcgaac
gagatccgtggagcacaaaccaaaggtgctgttgaagaagttggatttccataccctata
ctctccatcataggcgggggtagaagggaagttgatctttatgcttatatctttggtgct
gatctgagtgtgttcttcttggttgctattttctaccaatctgttaaaaaaaacaaaagc
gagttcttggatgtttcccaacttgaggatcagtttcccaaggactatgtatttatattg
atggcaatattcttcttgattgtgcttgaccgcatcatatacctctgttcatttgccaca
ggaaaagtgatctattacatttcaaatcttgttctttttacatatgtcgtcacagagtat
gcttggaatatagatgcacagcaaagtgctgctggattagccctccgtgcaatatatctg
acaaaagcaatatctctggcactgcaagccatacaaatccgctatggtgttcctcacaag
agcacattgtatcgccaattcctcaccagcaaagtttctcaaatcaattatctaggttac
cggctatatcgagctcttcctttcctgtatgaattacggtgtgtactggactggtcttgc
actaaaacttcattgacaatgtatgactggctgaagttggaagacataaatgcaagcttg
taccttgtcaaatgtgatgctgttctgaacagagctacacacaaaccaggggagaagcag
actaagatgaccaaattctgtaatggaatatgcttgttctttatattgatctgtgtaatc
tgggctcccatgctgatgtacagcagtggtaatccaactaacattgcaaatcctgtaaat
gatgtgagggttcagcttgatatcaaagaaaaaagtggaggaaggttaaccctctatcag
actactctttgtgaaatgattccatttaatcagctccatgatgatttgaatcttgacccc
aacggctatctttatgcatacaataaaaatgatatccaacttatctgctgtcaacctgat
gcaaatactctgtggctggttccggatgtggttcagagaagattcattctgtctctgaaa
gatatggaagttaaattttcttgggttcttacaagggacaggcctaaggacaaagaggtt
gtgaaatacgaaagaactcttgatcctgtggattgtccaaagccttgggaagttaagaaa
gttttgaatggctccaccaatagcttccgtgcatataatatatatcctagatatattcgc
gtgactggttctggggaagttaggactattgaagaggaggcaaatggtgttagcgcggat
atcattttaaatcggggagtctctgagtggtggtccttcaatgatatcaactcacaggat
gtaacaggctgtggagggttgatagggcctatggccataattgtatcagaggaaacacca
cagggcttgctgggtgaaactctcagcaaattcagtatatggggtctctacatcacattt
gttttagcagttggtcgcttcatcagactgcagtgctctgacctacgaatgagaatccca
tatgaaaatcttccttcatgtgacagattgattgccatctgtgaggatatatatgctgca
agagcagagggtgagctcgtagtggaggaaatcctatactggacgctagtgaagatatac
aggtctccacacatgttgctcgagtatactaagtctgattag
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integrated database retrieval system
