Solanum stenotomum: 125871193
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Entry
125871193 CDS
T08385
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
sstn
Solanum stenotomum
Pathway
sstn03250
Viral life cycle - HIV-1
sstn03272
Virion - Hepatitis viruses
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125871193
03272 Virion - Hepatitis viruses
125871193
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125871193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125871193
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125871193
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125871193
Exosome [BR:
sstn04147
]
Exosomal proteins
Proteins found in most exosomes
125871193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
Mod_r
ATG16
NDC80_loop
RWD
UQ_con
Met_asp_mut_E
Motif
Other DBs
NCBI-GeneID:
125871193
NCBI-ProteinID:
XP_049407750
LinkDB
All DBs
Position
7:complement(6073427..6074524)
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AA seq
349 aa
AA seq
DB search
MDYFKSLAQELFSTNFETPPSSIQFIDAALSCTSPHFAPSYTDPNQKRIIRRHLVSFLQD
YLSFKPSIDAFMHDDGTSVNLLNVNGELQLSSSTPSIPLTIWLHESYPFIAPIVFMSTNT
TYPIYDNHPFVDSSSGAISTFYLVNWKYPGCNLSDLVHNLFKIFSHNHPFYYSPSTDDFF
HPSLASRREAVDRLSCTLHYDMKELLSKTHEEVEELSSLKEHMVRRVIVAEFSVDESENE
MMELKERVKILTDEADKLSSWLRDKDQDLSSEYKIEDEFEAIDENSKILLDSIAADKATE
DLMYSLDKAVEQGVMPFGTYIKQVRLLAKEQYFGRATLEKMGISLEWLH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggactacttcaaatcattagctcaagagttattctccacaaactttgaaacacctcca
tcttcaatccaattcatagatgctgcactttcttgtacaagtccacattttgcaccatct
tacacagatcctaaccaaaaacgtataattcgaaggcatctcgtctcttttcttcaagat
tatctctctttcaaaccttccatcgatgcattcatgcatgacgatggcactagtgtcaac
ttactcaacgtgaacggagagttgcaactctcttcctccaccccttcaatccctcttacc
atttggttacatgaaagttacccttttatagcccctattgtattcatgtcaacaaatact
acttatccaatttatgacaaccatccttttgttgactcttcatcaggtgctatttcaaca
ttttacttggtaaattggaagtaccctggctgcaacctctctgaccttgtacacaatctt
ttcaagatcttttcacataatcatcctttctactattcgccttcaactgacgatttcttt
cacccttctttagcttctaggagggaggctgttgaccgtctctcgtgcacacttcattat
gacatgaaagaattactctccaagactcatgaagaagttgaggagctttcaagccttaaa
gaacatatggttagaagggtaattgttgctgagttttcggttgatgagagtgaaaatgaa
atgatggaattgaaggaaagggtgaaaatcttgacagatgaagcggataaactgtcgagt
tggctaagagataaggatcaagatttaagttcagaatataaaattgaggatgaatttgaa
gcgattgacgagaattcaaagatactacttgatagcatagcagcagataaagcaacagag
gatttgatgtactcattagataaggcagttgagcaaggtgtaatgccttttggtacatat
ataaaacaagtgagacttttggccaaagaacaatactttggtagagctacgcttgaaaaa
atgggaatatctctcgaatggcttcattga
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