Solanum stenotomum: 125871475
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Entry
125871475 CDS
T08385
Name
(RefSeq) zinc finger protein JACKDAW-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sstn03000
]
125871475
Transcription factors [BR:
sstn03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125871475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_6
zf-C2H2_4
DNA_pol_viral_C
Motif
Other DBs
NCBI-GeneID:
125871475
NCBI-ProteinID:
XP_049408022
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All DBs
Position
7:51720594..51723227
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AA seq
457 aa
AA seq
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MMSGDLFSIHQQQQVLVEQNPNPKANSSSKKRRNLPGTPDPDAEVIAISPKTLMATNRFI
CEICNKGFQRDQNLQLHRRGHNLPWKLKQRNKQEIVKKKVYICPEKTCVHHDPSRALGDL
TGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKTCGTREYKCDCGTLFSRKDSFITH
RAFCDALAEESARITSVGTTPNNLNFNQQQQQPVGISQIGTSFVQDFTSMTTVNPLHQHQ
QKPRLSLWLNQANNNMSSPSSNLFGLPDHHMVQIPSPNMFGTGSSIGNQILTPTTTTTNT
PATPNPPIPMSATALLQKAAQMGSTKSTPNYFSNTFGVMNSSSSPSSNNTTQIFNNNEIH
QAFAKQTEDYNQTENILINGCPNMNSSVHSKAINLDQALLQTGGMHNQTVHFNLHNSLTR
DFLGMGNEGGQPFLPQELAKFASMNAAMGLSHYSTGH
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctggagatttgttttcaattcatcaacaacaacaagtactagttgaacaaaac
cctaaccctaaagctaattcttcttctaagaaaagaagaaatcttccaggtacaccagat
ccagatgctgaagttattgcaatatcacccaaaacactcatggctacaaacagattcata
tgtgaaatctgcaacaaaggttttcagagggaccaaaacttgcaacttcatagaagagga
cataatcttccatggaagttaaagcaaaggaacaaacaagaaatagttaagaagaaagtt
tacatatgtccagaaaagacttgtgtacatcatgatccttcaagagcacttggtgacctt
actggtataaagaagcattttagcagaaaacatggtgagaaaaaatggaaatgtgaaaag
tgttcaaagaaatatgcagttcaatctgattggaaagctcatactaagacttgtggtact
agagagtataaatgtgactgtggaacactcttttccaggaaagatagtttcattacccat
agagctttctgtgatgctttagctgaagagagtgcaagaatcacttcagttggaactact
cccaacaatttgaacttcaatcagcaacaacaacaacctgttggaatttcccaaattggg
acaagttttgtccaagattttacaagtatgacaactgtgaatcctctacatcagcatcag
caaaaaccaagattatcactttggctaaatcaagctaataacaacatgtcatcaccaagt
tcaaatctttttggcttaccagatcatcatatggtccaaatcccatctccaaatatgttt
ggtactggatcatcaattggcaaccaaatacttacccccaccaccaccaccaccaacacc
cctgcaaccccaaatcccccaataccaatgtcagcaacagcccttctacaaaaagcagca
caaatggggtcaacaaaaagcacaccaaattacttttccaacacatttggagtaatgaac
tcatcatcttctccttcatcaaacaacacaacacaaatcttcaacaacaatgaaattcat
caagcttttgcaaaacaaacagaggattacaatcaaacagagaatatactcatcaatggg
tgtccaaatatgaattcatctgttcattctaaagcaatcaatttggatcaggcattatta
caaacaggtggcatgcataatcaaactgttcatttcaacttgcataatagtcttactaga
gattttttaggcatggggaatgaagggggtcagccatttttgccacaagaattggcaaag
tttgcttcaatgaatgctgctatggggttaagccattacagtactggtcactag
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