Solanum stenotomum: 125871575
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Entry
125871575 CDS
T08385
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
sstn
Solanum stenotomum
Pathway
sstn03250
Viral life cycle - HIV-1
sstn03272
Virion - Hepatitis viruses
sstn04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125871575
03272 Virion - Hepatitis viruses
125871575
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125871575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sstn04131
]
125871575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sstn04147
]
125871575
Membrane trafficking [BR:
sstn04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
125871575
Exosome [BR:
sstn04147
]
Exosomal proteins
Proteins found in most exosomes
125871575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Motif
Other DBs
NCBI-GeneID:
125871575
NCBI-ProteinID:
XP_049408158
LinkDB
All DBs
Position
7:complement(54158044..54164361)
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AA seq
402 aa
AA seq
DB search
MAPPPPEAAVHSPSSPQYTQQFLSNVLSQRGPSSLPYSEDVKWLIRQHLVSLIDMCPSLQ
PRTATFTYNDSRTVNLLQANGTVPMVYLDATYNIPVIIWLLESYPRQSPLVFVNPTRHMV
VKDSHPFVNSSGIVSIPYLTNWVYPSSNLVELVRNLSNFFSRDPPLYTKRNPNPNPHPPP
GTSFSNSGSTRPAIPPRVYPPSPYGSGSGGVVGRKMDDRSEVDKKNAIDELMVKLHSDIE
GLGKAREADMEGLFNAQGVLRRREEELRKGVKEMLDEKEGLEQQLQMVLMNTDVLEGWVR
DNETKVKKIGNVDVDEAFELCDRLSKQMSDCTASDLAMEDVIYSMDKAIQDGAIPFDQYL
RNVRLLSREQFIHRATASKVKAAQMQAQVSHMASRLSQYALS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaccacctccggaggcggcggttcactctccttcatctccccaatacactcaa
caattcttaagcaacgttctctcccaacgaggtccttcttctctcccttactccgaagac
gtcaaatggctgatccgtcaacacctcgtttcgttaatcgacatgtgtccttctcttcaa
cccagaaccgctactttcacttacaacgacagcaggactgtgaatctccttcaggcgaac
ggcaccgttccgatggtctatctagatgcaacctacaatattccggtcattatttggtta
ctggaatcttaccctcgtcaatcaccgttggtattcgtgaaccccacgcgtcatatggtc
gtcaaagactcacatccatttgtgaactcttctggtattgtttcgatcccttatttgaca
aattgggtatacccaagttcgaatcttgttgaattagttcgtaatttgagtaattttttt
agccgtgatccccctttgtacaccaaacggaacccgaacccgaatccgcatcctcctccg
ggtactagtttttcgaatagtgggtcgactcgacccgcgataccacctcgggtgtatcca
ccatcaccttatgggagtgggagtggtggggtagtggggaggaaaatggatgatcggtcg
gaggtggataagaagaatgcaatagatgagcttatggtgaaactgcatagtgatattgaa
gggttggggaaggcgagggaggcggatatggaagggttgtttaatgcacaaggagtgttg
aggcgtcgagaggaggagttgaggaaaggggttaaggaaatgctggatgaaaaggagggg
ttagagcagcaattacagatggttttgatgaatactgatgtgttggaagggtgggttaga
gataacgaaacgaaagtgaagaaaatagggaatgtggatgtggacgaggcgtttgagctt
tgtgatagactttcaaaacagatgtcggattgtactgcctcggatttggctatggaggat
gtgatttattcgatggataaagctatacaggatggggcaattccttttgatcagtacttg
aggaatgtaaggttgttgtcgcgtgaacaattcattcatcgtgccacggcttcgaaggtt
aaggctgctcagatgcaggctcaagtttctcatatggcttctaggctgtctcaatatgca
ttgtcatag
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