Solanum stenotomum: 125871607
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Entry
125871607 CDS
T08385
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
sstn
Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:
sstn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sstn01009
]
125871607
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sstn03021
]
125871607
Enzymes [BR:
sstn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125871607
Protein phosphatases and associated proteins [BR:
sstn01009
]
HAD phosphatases
Fcp/Scp phosphatases
125871607
Transcription machinery [BR:
sstn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
125871607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
Ribosomal_S5
Motif
Other DBs
NCBI-GeneID:
125871607
NCBI-ProteinID:
XP_049408193
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All DBs
Position
7:56183864..56195405
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AA seq
811 aa
AA seq
DB search
MSRLGFKSLVFQGETCLGELDTIPVKDQNFQFPNNEIRIDHISTNSERVHPIAVLRTISS
PVRCKLEPNSNSASIGSEKSPLITLHSSCYYDLKTAVVFLGEEEIHLVAMASKQKKFPCF
WCYSVPIGLYSACLQMLNMRCLSIVFDLDETLIVANTMKSFEDRIEALRGWLAREMDPIR
SSGMAAEMRRYMEDRALLKQYLESDSVVDSGGIYRAQQEEVLPLSEGQERVVRPVIRLEE
KNVVLTRINPENRDTSVLVRLRPAWDELRTYLTAKGRKRFEVYVCTMAERDYALEIWRLL
DPGSHLINANQLMDRVVCVRSGAKKSLLTVFRNGICHPKLAMVIDDRLKVWEDKDQPRVH
VVPAFAPYYAPLAEMANAVPVLCVARNVACDVRGRFFKEFDEGLLRKICEIFYEDEAVNL
PSAPDVSNYLMSEDAGFASCGIPAPIPEGMFGPEVTQRLNQQERKVNMNSAPVFMSNNPD
MKPGSSQLMVGIAANVPAQSVRPIQPSEKPSLLGAPFRRDNSFSEADGDGKRRYPILNPS
QDMRYRGSAEPPLLPRVPQKPPILPIPSQGGWLVEDDLNKGQMGSRSPGIFQESDASRYA
KQRGHQNFMSQDATNMMLPTYASAGKNGEVNFRHEMHRQNSLIHQTEGRFSQHQSLFNNR
ESQLEAGRMNFLPSLATGVLQEIGRRCNSKVEFRPVVSTSEELQFSVEVFFIGERVGVGM
GKTRKDAQQQAAENALRNMAGEYVSYITSHPRAADKDFDKISVENENGFLWDTVNHVDEP
SVEDRLPQVNVSEVGVNGDASHDRSLNSLKT
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggttcaaatccctggtgtttcaaggagaaacgtgtctaggagagctg
gataccatacctgtgaaggatcagaacttccaattcccaaacaacgagatacggattgat
catatctctacaaatagtgagcgggttcatcctattgctgttttgcgaacgatttcatca
cctgttcgttgtaagcttgaaccgaactcgaattcagcgtcaattggttccgagaagtct
ccgttgataactcttcattcctcgtgctactatgacctcaagactgcagtagtctttctg
ggggaagaagaaatacatttggtagcaatggcgagtaagcagaaaaagttcccctgtttt
tggtgctattcagtgcccattggtctgtatagtgcttgtttgcagatgttgaatatgagg
tgtctatcaattgtttttgatctggatgagaccttaattgttgcaaatacaatgaagtcg
tttgaagatagaattgaggctttgcggggttggttagcacgagagatggatccaattcgg
tcgtctggaatggccgctgagatgaggaggtatatggaggatcgtgcactgctgaagcag
tatttagagagtgattctgttgttgacagtgggggaatatatagagctcagcaagaggag
gtgctaccattatctgaagggcaggagcgtgtagttcggccagtcataaggttggaggaa
aagaatgtggtccttacacggattaatccagagaatcgggataccagcgtgcttgttaga
ttacgtcctgcgtgggatgagttgagaacttatttgacggcgaaaggtcggaaaaggttt
gaagtatatgtttgcaccatggcagagagagattatgccttggagatttggaggctactt
gacccagggtcacacctcattaatgccaatcaattgatggaccgtgttgtatgtgttaga
tcaggggccaagaagtctttacttactgtcttccgaaatggcatttgtcatccaaaattg
gcgatggttattgatgaccgattaaaagtgtgggaagataaagatcaacctcgtgttcat
gttgtccctgctttcgctccatattatgctccgctagcagagatggccaatgcagtaccg
gtcctgtgtgtggcgagaaatgttgcttgtgatgttagaggtcgtttctttaaagagttt
gatgaaggcctactccgaaagatctgcgagatcttctatgaagatgaggctgtaaattta
ccttctgcgcctgatgttagcaactacttaatgtccgaggatgctggttttgcgtcatgt
gggattcccgctcctattcctgagggaatgttcgggcctgaagttacacaaaggttgaat
caacaggagagaaaagttaatatgaactctgctcctgttttcatgagtaacaatcctgat
atgaagccaggaagctcccagcttatggttggaattgctgcaaatgtacctgctcaatca
gtgagaccaattcaaccttcagaaaaaccaagtttgctgggagctccatttagacgagat
aacagcttttctgaagctgatggtgatgggaagagaaggtaccccatattgaatcctagc
caggatatgaggtatcgtggttcagcagaacctcctttattacctagagtgcctcagaaa
ccacccatactgcccataccatcacagggtggatggttggtggaagatgacctaaataaa
ggacagatgggtagtcgatcaccaggaatttttcaagaatctgatgcatcaaggtatgct
aaacagagaggtcatcagaattttatgagtcaagatgcaacaaacatgatgttaccaact
tatgcatctgcagggaagaatggggaggtaaatttcaggcatgaaatgcatagacagaat
tctcttattcatcagacagagggtagattctctcaacatcagtcgttatttaacaacaga
gaatctcaactagaagctgggagaatgaacttcttgccatctttagctactggagtgctg
caagaaattggacggcgatgcaactcaaaggttgagttcaggcctgtggtgagcactagt
gaggaattgcaattttcagttgaggtcttctttatcggtgagagagttggtgttgggatg
ggtaagactaggaaggatgctcagcaacaggcagctgagaatgcacttcggaacatggct
ggtgaatacgtctcatacattacatctcaccctcgagcagcggataaagactttgataag
atttcggtggaaaatgaaaatgggttcttgtgggacactgtcaatcacgtggatgaacct
tcagtggaggatagattacctcaagtaaatgtttcagaggtgggagttaatggtgatgct
tcccatgaccgatcacttaattctttgaaaacatga
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